Pseudomonas hamedanensis: HU739_018305
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Entry
HU739_018305 CDS
T07661
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
phv
Pseudomonas hamedanensis
Pathway
phv02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
phv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU739_018305 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
phv02044
]
HU739_018305 (tssC)
Secretion system [BR:
phv02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU739_018305 (tssC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
VMAP-M0
Motif
Other DBs
NCBI-ProteinID:
QXI15861
UniProt:
A0A9E6TER6
LinkDB
All DBs
Position
4230114..4231589
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AA seq
491 aa
AA seq
DB search
MSTSAAQEKSAASGEYSILDSIIAETRLTPDDEAYDIAKRGVSAFIEELLKPQNNGEPVK
KAMVDRMIAEIDAKLSRQMDEILHHPDFQALESSWRGLQLLVDRTNFRENIKIEILNVSK
EDLLDDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAIIANYYMSPSSPDVKLMQYVASV
SCMSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRTSEDSRYVGLTVP
RFLLRNPYDPEENPVKSFVYKETVANSHEHYLWGNTAYAFGTKLTDSFAKFRWCPNIIGP
QSGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSA
SSVQKPKFFGISAEGKAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLEL
ELNKWIRQYVADQENPSAEVRGRRPLRAAQVIVSDVEGEPGWYRVSLNVRPHFKYMGADF
TLSLVGKLDKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagcactagcgcagcacaagagaagagcgccgccagcggcgaatacagcattctcgac
agcatcatcgccgaaacccgtctgacgcctgacgacgaagcctacgacatcgccaagcgt
ggcgtgtcggcgttcatcgaagagctgctcaaaccgcagaacaacggtgagccggtcaag
aaagccatggttgaccgcatgatcgccgagatcgatgccaagctcagccgtcagatggac
gagatcctgcaccacccggatttccaggcgctggaatcgtcgtggcgtggtctgcagttg
ctggtcgaccgcaccaatttccgcgaaaacatcaagatcgaaatcctcaacgtctccaaa
gaagacctgctggacgatttcgaagattcgccggaagtcatgcaatccggcctgtacaag
cacatctacaccgctgaatacggccagttcggtggtcagccggtgggcgcgatcatcgcc
aactactacatgtcgccaagctcgccagacgtcaagctgatgcagtacgtggccagcgtt
tcgtgcatgtcccacgcgccgttcatcgctgctgccggcccgaaattcttcggtctggaa
agcttcaccggcctgccggatctgaaagatctgaaagaccacttcgaaggcccgcaattc
gccaaatggcagagcttccgtacctcggaagactcgcgctacgttggtttgaccgttccg
cgttttctgctgcgtaacccgtacgacccggaagaaaacccggtcaaatcgttcgtgtac
aaggaaaccgttgccaacagccacgagcactacctgtggggcaacactgcctacgcgttc
ggcaccaagctgaccgacagcttcgccaaattccgctggtgcccgaacatcatcggcccg
cagagcggtggcgcggttgaagacctgccgttgcaccatttcgaaagcatgggcgaaatc
gaaaccaagattcctaccgaagttttggtcagcgaccgtcgtgaatacgaactggccgag
gaaggcttcatttccctgaccatgcgcaaaggctccgacaacgcggcgttcttctccgca
agctcggtgcagaagccgaagttcttcggcatcagcgcagaaggcaaggcggcagagctg
aactacaagctcggcacccaactgccgtacatgatgatcgtcaaccgcctggctcactac
ttgaaagtgctgcagcgcgagcaactcggttcgtggaaagaacgtaccgacctcgagctg
gaactgaacaagtggatccgtcagtacgtcgccgaccaggaaaacccgagcgccgaagtg
cgtggccgtcgtccgctgcgcgctgcgcaagtgatcgtcagcgacgttgaaggcgagcca
ggctggtaccgcgtgagcttgaacgtgcgtccgcacttcaagtacatgggtgccgatttc
accctgtcgctggttggcaagctggataaagagtaa
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