Pseudomonas hamedanensis: HU739_018355
Help
Entry
HU739_018355 CDS
T07661
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
phv
Pseudomonas hamedanensis
Pathway
phv02025
Biofilm formation - Pseudomonas aeruginosa
phv03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
phv00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HU739_018355 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU739_018355 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
phv02044
]
HU739_018355 (tssH)
Secretion system [BR:
phv02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU739_018355 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
ClpB_D2-small
AAA_22
AAA_16
NACHT
Clp_N
AAA_7
TniB
nSTAND3
Sigma54_activat
NBD_SMAX1
AAA_30
AAA_25
AAA_24
Hpr_kinase_C
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QXI15871
UniProt:
A0A9E6NXR6
LinkDB
All DBs
Position
4237746..4240403
Genome browser
AA seq
885 aa
AA seq
DB search
MINVDLQQLIQALDAETRRDLERSAERCVARGGSKILVEDLLLGLLERPNGLLSRALQDA
DVDAGELTAALQSRVEHSASRNPVFAPELVQWLQDALLVANLELGQTQVEDAALILALLR
NPMRYAGSRYQPLLAKLNIDRLKEFALSQQEQPAANGKPAAQGESLLQRFTHNLTQQARD
GKLDPVLCRDGAIRQMVDILARRRKNNPIVVGEAGVGKTAIVEGLASRIAAGEVPQVLKG
VELLSLDMGLLQAGASVKGEFERRLKGVIDEVKASPKPIILFIDEAHTLIGAGGNAGGSD
AANLLKPALARGELRTIAATTWAEYKKYFEKDPALARRFQPVQLHEPTVSEAVTILRGLA
QVYEKSHGIYLRDDAVVSAAELSARYLAGRQLPDKAVDVLDTACARVRISLAAAPESLER
LRGELAEGGRQRQALRRDAEAGLLIDHEALDALEARLDEAENEMVALETLWTEQKALAER
LLELRQQLAKAREAAAVEPTVSVEEDAEGTVIETVVAEVEEDQSVEALEAQLHETHAALT
AAQVKERLVSFEVCPRLVAEVISAWTGVPLAQLAREHNAKVASFATDLRTRIRGQEQAVH
ALDRSMRATAAGLNKPDAPVGVFLLVGPSGVGKTETALALADLLYGGDRFITTINMSEFQ
EKHTVSRLIGAPPGYVGYGEGGMLTEAVRQKPYSVVLLDEVEKADPDVLNLFYQIFDKGV
ANDGEGREIDFRNTLILMTSNLGSDKISDLCEDGARPTAEVLEETIRPVLSKHFKPALLA
RMKVVPYYPVGGPVLRELIEIKLGRLGERLNRRQLDFSWCQNLVDHLSERCTQSESGARL
IDHLLDQHVLPLVADRLLDAMATGESLKRVHATLDGNASVMCEFA
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacgtagacctgcaacaactcatccaggcgctggacgccgaaacccgtcgtgat
ctggaacgttcggccgagcgttgcgtcgcccgtggcggcagcaagattcttgtcgaggac
ttgctgctgggcctgctggagcgtccgaacggcttgctcagccgcgccctgcaagatgct
gacgtcgatgccggtgaactgaccgctgcactacaatcgcgggtcgagcacagcgcttcg
cgcaacccggtgttcgccccggaactggtgcaatggctgcaagatgcgctgctggtggcc
aaccttgagctgggccagacccaggttgaagacgccgcgctgattctggctttgctgcgt
aacccgatgcgttatgccggcagccgttatcagccgctgctcgccaagctgaacatcgat
cgcctgaaagaatttgccctgtcgcaacaggagcaaccggcggccaatggcaaaccggcc
gcacagggcgaatcactgttgcagcgcttcacccacaacctgacccaacaggcccgcgac
ggcaaactcgacccggtgctgtgccgtgacggtgcgatccggcagatggtcgacatcctt
gcccgtcgtcgcaagaacaacccgatcgtcgtcggtgaggccggtgtcggtaaaaccgcc
attgtcgaaggtctggcatcgcgcatcgctgccggtgaagtgccgcaggtgcttaagggt
gtcgaattgctgtcgctggacatgggcctgttgcaggccggcgccagcgtcaaaggtgag
ttcgagcgccgtttgaaaggcgtgatcgacgaagtcaaggcttcgccgaaaccgatcatt
ttgttcatcgacgaagcccacactctgatcggcgctggcggcaacgctggcggttccgac
gcggccaacctgctgaaaccggcgctggcccgtggcgaactgcgcaccatcgccgcgacc
acctgggccgagtacaagaaatacttcgagaaagatccggcactggcccgtcgtttccag
ccagtgcaactgcacgaacccaccgtcagcgaagcggtgaccattctgcgtggtctggcc
caggtctacgagaagagccacggcatttacctgcgcgatgacgcggtggtgtccgccgcc
gaattgtccgcgcgttatctggccggtcggcaactgccggacaaggccgtcgatgtgctc
gacaccgcgtgtgcccgcgtacgcatcagcctcgcggctgctccggaaagtctggagcgc
ctgcgcggggaactggctgaaggtggccgtcagcgccaggccttgcgtcgcgatgccgag
gctggtctgctgatcgaccacgaggcgctggacgcactggaagcgcggctggacgaagcc
gaaaacgaaatggtcgcgctggaaaccttgtggactgagcagaaagctttggccgagcgc
ctgctggagctgcgtcagcaactggccaaggcccgcgaagccgcagccgtcgagccgacc
gtcagcgttgaagaagacgccgaaggcactgtgattgagaccgtggtcgccgaagtcgaa
gaagaccaaagcgtcgaagcgctggaagctcagctgcatgaaacccacgccgcgctgacc
gctgcgcaagtcaaagaacgtctggtcagtttcgaagtgtgcccgcgtctggtcgccgaa
gtgatcagcgcctggaccggcgtgccattggcgcaactggcccgcgagcacaacgccaag
gtcgccagtttcgctaccgatctgcgcacgcgtatccgtggtcaggaacaagccgtgcac
gcactggatcgctcgatgcgcgccaccgctgccggtctgaacaagcctgacgcaccggtc
ggtgtgttcctgttggtcggcccgagcggcgtcggcaagaccgaaaccgcgctggccctg
gctgacctgctgtacggcggcgatcgcttcatcaccaccatcaacatgtccgagttccag
gagaagcacaccgtctcgcgcctgatcggtgcaccgccgggctacgtcggttacggcgag
ggcggcatgctcaccgaagccgtgcgccagaagccttactcggtggtactgcttgatgaa
gtcgagaaggctgacccggacgtgctcaacctgttctaccagatcttcgacaagggcgtg
gccaacgacggcgaaggtcgcgagatcgatttccgcaacacgctgatcctgatgacctcg
aatctgggtagcgacaagatcagcgacctctgcgaagacggcgcgcggccaaccgccgaa
gtgctcgaagaaaccattcgcccggtgctcagcaagcacttcaaaccggcgctgctggcg
cggatgaaagtagtgccgtactacccggtgggcggcccggtgctgcgcgagctgatcgag
atcaaactcggccgtctcggcgagcgcctgaaccgtcgccagctggatttcagctggtgc
cagaaccttgtcgatcatctgtccgagcgctgcacgcaaagcgaaagcggcgcgcgcctg
atcgaccatctgctcgatcagcacgtgctgccgctggtggccgatcgtctgctcgatgcc
atggcgaccggcgaaagtctcaagcgtgtgcatgccacgctcgacggcaacgccagcgtg
atgtgcgagttcgcctga
DBGET
integrated database retrieval system
