Pseudomonas hamedanensis: HU739_018380
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Entry
HU739_018380 CDS
T07661
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
phv
Pseudomonas hamedanensis
Pathway
phv02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
phv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU739_018380 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
phv02044
]
HU739_018380 (tssK)
Secretion system [BR:
phv02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU739_018380 (tssK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
QXI15876
UniProt:
A0A9E6TES1
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All DBs
Position
4244096..4245427
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AA seq
443 aa
AA seq
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MNTHKVIWQEGMLLRPQHFQHNDRYYDHQMKTRTQLLGGYTWGFLNLEIDLQFLNMGKLV
ISEASGILPDGSLFELGGNTEPLALDVPPNTGNTPIYLALPLVTGNHIEARRPEQSDVLA
RYTAYDAEVADSNAGDDSASQVSCGRPDFKLLLGEQQSDQAYVKLKICDVLDTTPDGVIS
LDPDFVPTYIQAHASSYLLSCLKEVISMLSHRGDTIAERIRSNGKVGGAEVGDFMMLQLI
NRTELLLRHYLGLEQVHPEELYRTLLTMLGDLATFSGESKRPRLDSRYSHADQGGSFRKL
MEAIRQVLSMVLEQHAIELILQARQYGIIVSPLHDHKLLGSASFVLAASANCDSEELRHR
LPAHLKVGPVERIRQLVNLHLPGIKVKPLPVAPRQIAFHSNKTYFILELSSEDLAQLERS
GGFAFHVSGEFAELELKFWAIRN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaacacccataaagtcatttggcaggaaggcatgctgctgcgaccgcagcacttccag
cacaacgatcgttattacgatcaccagatgaaaacccgcacccagttgctcggtggctac
acctggggttttctcaatctggagatcgacttgcaattcctcaacatgggcaaactggtg
atcagtgaagcctcggggattctgccggacggcagcctgttcgaactcggcggcaacacc
gaaccgctggcgctggacgtgccgccgaacaccggcaacacgccgatctatctggcgctg
ccactggtcaccggcaaccacatcgaggcccgtcgcccggagcaatccgacgtgctggcg
cgttacacagcgtatgacgccgaggtggctgattccaacgccggcgacgactccgccagt
caggtcagttgtgggcgcccggacttcaaactgttgctcggcgagcagcagagcgatcag
gcctacgtgaagctgaagatctgcgacgtgctcgacaccacgcccgacggtgtcatcagc
ctcgacccggattttgtgccgacctacattcaggcccacgcttccagctatctgctgtcg
tgcctgaaagaagtcatcagcatgctcagccaccgcggcgacaccattgccgagcggatt
cgctccaacggcaaggttggtggtgccgaagtcggcgacttcatgatgctgcaactgatc
aaccgcaccgaactgctgctgcgccattacctcggccttgagcaggtgcatcccgaagag
ttgtaccgcacgctgctgaccatgctcggcgatctggcgaccttctccggcgagagcaaa
cgcccgcgtctggacagccgctattcccacgcggaccagggcggcagtttccgcaaactg
atggaagcgatccggcaggtgctgtcgatggtgctcgagcagcacgccatcgaactgatc
ctgcaggcgcgtcagtacggcatcattgtgtcgccgttgcacgaccacaaactgctcggc
tcggcctcgttcgtgctggcagccagtgccaactgcgactccgaagaactgcgccaccgc
ttgccggcgcacctcaaggtcggcccggtggagcgcatccgccaactggtcaacctgcac
ctgccggggatcaaggtcaaaccgttgccggtggccccacggcagatcgcgttccactcg
aacaaaacctatttcatcctcgaactcagttccgaagacctggcacaactcgagcgctcc
ggcggtttcgcgttccacgtgtccggcgaattcgccgagcttgaactgaaattctgggcc
atcaggaactga
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