Pseudomonas hamedanensis: HU739_018390
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Entry
HU739_018390 CDS
T07661
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
phv
Pseudomonas hamedanensis
Pathway
phv02025
Biofilm formation - Pseudomonas aeruginosa
phv03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
phv00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HU739_018390 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU739_018390 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
phv02044
]
HU739_018390 (tssM)
Secretion system [BR:
phv02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU739_018390 (tssM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
Motif
Other DBs
NCBI-ProteinID:
QXI15878
UniProt:
A0A9E6TFD6
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All DBs
Position
4246323..4249862
Genome browser
AA seq
1179 aa
AA seq
DB search
MKKFFKKVGAFLRQTWVWTLLLVLFVALLVWFVGPLLAVDDYKFWESATSRLLTISVLFL
IWGLTMVFVSWRAGIRKKAEEESEDGQDRIRREELIDEEQKELKARFKDALKTLKTSSLY
RGRSERWRSDLPWYLLIGPQASGKTSLLDFSGLEFPINKIDRKLTRDTLGTRHCDWYFAD
HGVLIDTAGRYTTQPDAEVDGNAWTTLLELLRKRRRGRPLNGVLVTIPVETLTGGSEQDI
DTLARQVRSRLQDVHQKLHVDVPVYLVLSKADKLLGFDEFFDQLTREESDQVLGTSFRKD
QVGTDVAVLRNEFEELLRRLNSQVIMRMHSERDTQRRGRILDFPHQLGQIGERLCLFVDM
AFTGNRYQRATQLRGFYLTSAPHLTQEMDSTTAGIGASLGMNAGVLPTLRSGRSRFIHHL
LSQVIFPEADLAGLDKRERSRIHWGQRALYVGALAALALFGMLWAGGFSANYERLENLRT
LAQNWTQQRSAVSPRDDAMGVLKVLDTSYAATQVFPSKSDVSYHERGGLYQGEDINPVVK
TAYERELEAQLLPRVATLLEGQIRANMKDRDRLLNSLRAYLMLNMKDRRDAAWLKDWIAT
DWSQRYTGNTAVQNGLNTHLERLLKQPFIYPLNDQLVTQARQVLRSESLANVVYRMLREQ
ARNLPDYRFSQHLGPQGSLFIGTEYVIPGFYTQQGYQQYFSVQGAALVTDILRDNWVLGE
GAGISDMDLRRLMVELEQLYFRDYANYWSEAVGQVALPPISDAGEGAEQLAGLTSANSPV
LALLTEVRENTRFEAAADPVDEAGEAADALAGQKGKLGKVGKLAAAAADKASALNVAKNL
PDTAKKSLQRRFEPLHRLLDDNNGPGADLTPAFNALNDLQLQLAGLARSSTPEQAAFEMA
KTRMSGQRDALTNLRNASGRLPRPLSVWFNVLAEDSWRLVLNDAYQYLNGRYQNELYSVY
GKTISKRYPFSASSTSDVSISDFREFFKAQGIVDRFFDSYMRPFVSGDPGNYRMRSVDGH
SLPVSKVYLDQMAAALTIRQSFFSINPAEPTVQFKLEPYTLDPAVSRSEFKFGDKTMEYR
HGPILPMTFKWPTDAEDGRTSLVMDKMAGRPIGIEKNSGPWSLFRLFDLMQTEYLTGRDV
LVLKADVGGLRANYLLTSQRSPNPFDLGVLRTFRMPVQL
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtttttcaagaaagtcggcgccttcctgcgccagacctgggtctggaccttg
ctgctggtgctgttcgtggcgctgctggtgtggttcgtcggcccgttgttggcggtcgat
gattacaagttctgggaaagcgcgacctcgcgcctgctgaccatcagcgtgctgttcctg
atctggggcctgaccatggtcttcgtcagctggcgcgccggtatccgcaagaaagccgag
gaagaaagcgaggatggccaggaccgcattcgccgcgaagagctgatcgacgaagagcag
aaggagttgaaggcgcgtttcaaggacgcactgaaaaccctgaaaacgtcgagtctgtat
cgcggccgcagcgagcgctggcgcagtgatttgccgtggtacctgctgatcggtccgcag
gcttcgggcaagaccagcctgctggatttttccggcctggaatttccgatcaacaagatc
gaccgcaagctgacccgcgacaccctcggcactcgtcattgcgactggtatttcgccgac
cacggtgtgctgatcgacactgccgggcgctacaccactcagccggacgccgaagtcgac
ggcaacgcctggaccaccttgctcgagctgctgcgcaagcgccgtcgcggtcgtccattg
aacggcgtgctggtgaccattccggtggaaaccctcaccggcggcagcgagcaggacatc
gatacgctggcgcgccaagtgcgcagccgtctgcaggatgtgcatcagaaactgcacgtc
gatgtgccggtgtatctggtgctgagcaaggctgacaagctgctgggcttcgacgagttc
ttcgatcagctgacccgcgaagaaagcgatcaggtgctcggcaccagcttccgcaaggat
caggtcggcaccgacgtggcggttctgcgcaacgagttcgaagagctgctgcgacgcttg
aacagccaagtgatcatgcgcatgcactccgagcgcgacactcagcgccgtgggcgcatc
ctcgacttcccgcatcaactcgggcagatcggcgagcgcctgtgcctgttcgtcgacatg
gcgttcactggcaaccgttatcagcgggccacgcaactgcgcggtttctacctgaccagc
gcgccacacctgacccaggaaatggattcgaccaccgccggcatcggcgccagtctcggc
atgaacgccggtgtgctgccgaccctgcgcagcggccgttcgcgtttcatccaccacttg
ctcagccaggtgattttccccgaagccgatctggccggtctggacaagcgcgagcgcagc
cgcattcattggggccagcgcgcgctgtacgttggcgcactggcggcattggccttgttc
ggcatgctctgggccggtggtttctcggccaactacgagcgtctggaaaacctgcgcacg
ctggcgcagaactggacccagcaacgctcggccgtttcgccgcgcgatgacgccatgggc
gtgctgaaagttctggatacgagttacgccgcgacccaggtgttcccgagcaaaagcgac
gtgtcgtaccacgagcgtggcggcctgtatcagggcgaagacatcaatccggtggtcaag
actgcttacgagcgtgagcttgaagcgcagttgctgccacgggtggcgaccctgctcgaa
gggcagatccgcgccaacatgaaggaccgcgatcgcctgctcaacagcctgcgcgcgtac
ctgatgctgaacatgaaggaccgtcgcgatgcggcgtggctcaaggactggatcgccact
gactggtcgcagcgctacaccggcaacaccgcggtgcagaacggtctgaacactcacctc
gagcgcttgctcaagcagccgttcatttatccgttgaacgaccaactggtgacacaggca
cgtcaggttctgcgcagcgaatcgttggccaacgtggtttaccgcatgctccgcgagcag
gcgcgcaacctgccggactatcgcttcagccaacacttgggcccacaaggctcgctgttc
atcggcaccgaatacgtgataccggggttctacacccagcagggttatcagcagtatttc
tcggtacagggcgcggcgctggtcaccgatatcctgcgcgacaactgggtgctgggcgaa
ggcgcgggcatcagcgacatggacttgcgtcgcctgatggtcgagctggagcaactgtac
ttccgcgactacgccaactactggagcgaagccgttggccaggtcgcattgccaccgatc
agcgacgccggcgaaggcgccgaacaactggcgggcctgacttcggccaactcgccggta
ctcgcgttgctcaccgaagtgcgtgaaaacactcgcttcgaagccgcggccgatccggtc
gatgaagccggcgaagcggccgatgcgctggccgggcagaaaggcaaactgggcaaggtc
ggcaaactcgccgctgctgccgccgacaaggcttcggcgctgaacgtggcgaaaaacctg
ccggacaccgcgaagaaatccctgcaacgtcgcttcgagccgctgcatcgtttgcttgat
gacaacaacggcccgggcgctgacctgacgccagcgtttaacgcgctcaacgacctgcaa
ttgcaactggccggtctggcccgttccagcacgccggaacaggctgcgtttgaaatggcc
aagacgcgcatgagcggccagcgtgatgcgctgaccaacctgcgcaatgcttccggtcgc
ctgccgcgtccgctgagcgtgtggttcaacgtgctggccgaagactcgtggcgcctggtg
ctcaacgatgcctaccaatacctgaacggtcgttatcagaacgagctgtacagcgtgtat
ggcaaaaccatcagcaagcgttatccgttcagcgccagcagcaccagcgatgtttcgatc
agcgatttccgcgagttcttcaaggcgcagggcattgtcgaccgtttcttcgacagctac
atgcgtccgttcgtcagcggcgatccgggcaactaccgcatgcgcagcgtcgacggtcac
agcctgccggtgtcgaaggtctacctcgaccagatggccgccgcactgacgattcgtcag
agcttcttctcgatcaacccggccgagccgaccgtgcagttcaagcttgagccgtacacc
ctcgatccggcggtcagccgttccgaattcaagttcggcgacaagaccatggaataccgt
cacggcccgatcctgccaatgaccttcaagtggccgaccgatgctgaagacggtcgcacc
agcctggtcatggacaagatggccggacgcccgatcggtatcgagaagaactctggccct
tggtcgctgttccgtctgttcgatctgatgcagaccgagtacctgaccggtcgcgacgtg
ctggtgctgaaggcggacgtaggtggcttgcgcgccaactacctgctgaccagccagcgc
tcgccgaacccgtttgacctgggcgtgctgcgcaccttccgtatgccggtgcagctctga
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integrated database retrieval system
