Pseudomonas hamedanensis: HU739_018805
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Entry
HU739_018805 CDS
T07661
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
phv
Pseudomonas hamedanensis
Pathway
phv00300
Lysine biosynthesis
phv00470
D-Amino acid metabolism
phv01100
Metabolic pathways
phv01110
Biosynthesis of secondary metabolites
phv01120
Microbial metabolism in diverse environments
phv01230
Biosynthesis of amino acids
Module
phv_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
phv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HU739_018805 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HU739_018805 (dapF)
Enzymes [BR:
phv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HU739_018805 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
SPO11_like
Motif
Other DBs
NCBI-ProteinID:
QXI15955
UniProt:
A0A9E6NXV2
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Position
complement(4337670..4338500)
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLVSQHAHIQPKHAKQWGDRHTGIGFDQLLIVEAPSNPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTAKRQMRVETKGGIIELDVRNDGQIGVNM
GAPRLVPADIPFEAPAQASSYQLEVDGTTVELAAVSMGNPHAVIRVDDINSAPVHELGPK
IEHHPRFPARVNVGFLQVIDRHRAQLRVWERGAGETQACGTGACAAAVAAITQGWMDSPL
LIDLPGGRLSIEWAGPGQPVLMTGPAVRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttaccaaaatgcacggcctgggcaacgatttcatggtcctcgacctg
gtcagccagcacgcgcacattcagcccaagcacgccaaacaatggggcgaccggcacacc
ggtatcggtttcgaccagttgctgattgtcgaagcaccgagcaacccggacgtggatttc
cgctatcggatcttcaactccgacggttccgaagtggagcagtgcggcaacggcgcgcgc
tgctttgcccgtttcgtgctcgacaaacgcctgaccgccaaacgtcagatgcgcgtcgag
accaagggcggcatcatcgaactggacgtgcgtaacgacggccagatcggcgtgaacatg
ggcgcgccgcgtctggtgccggcggatatcccgttcgaagcgccagcccaggccagcagc
tatcaactggaagtcgatggcaccacggtcgaactggccgccgtgtcgatgggcaatccc
catgcggtcattcgcgtggacgacatcaacagtgcaccggtgcatgaactggggccgaag
atcgaacaccatccgcgcttcccggcgcgggtcaatgtcgggtttcttcaggtcatcgat
cggcaccgtgcgcaattgcgcgtctgggaacgcggcgccggggaaacccaggcctgcggc
accggcgcctgtgccgccgcggttgccgccatcactcaggggtggatggattcgccactg
ttgatcgacctgcctggcgggcgtctgtccatcgagtgggcaggcccgggccaaccggtg
ttgatgaccggtccggcagtgcgtgtatatgaaggacaagtgcgtctttga
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