Pseudomonas hamedanensis: HU739_024345
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Entry
HU739_024345 CDS
T07661
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
phv
Pseudomonas hamedanensis
Brite
KEGG Orthology (KO) [BR:
phv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phv03400
]
HU739_024345 (phrB)
Enzymes [BR:
phv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HU739_024345 (phrB)
DNA repair and recombination proteins [BR:
phv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HU739_024345 (phrB)
Prokaryotic type
HU739_024345 (phrB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QXI16993
UniProt:
A0A9E6NZX9
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All DBs
Position
5570054..5571499
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AA seq
481 aa
AA seq
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MQLIWLRSDLRQHDNTALAAAAARGPTVAVYLLSPQQWLEHDDAPCKVDFWLRNLRELSH
SLGALNIPLLIRSAAHWDQAPAELLKLCRQLKIEAVHVNEEYGVHESRRDEAVAETLRAE
GIEFHSYLDQLLFKPGTVLTRTGTYFQVFSQFRKVCYERLHGSLPSRLKAPGKQAALNIA
SDAIPDEVKGFATPSESLRALWPAGEEEARRRLDTFTDAQIDYYQSERDFPAKPGTSQLS
PYLAAGVISPRQCLHAALHSNQGEFESGKVGAVTWINELLWREFYKHILVGYPRVSRHRA
FRPETEALAWRNAPEDLKAWQEARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTKNLL
IDWREGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFNPVSQSEKFDAEGVFIK
HWLPELAGLNKKQVHNPASAGGLFGVADYPAPIVNLGASRDRALTAFKNLPSRQSAGAVN
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgatctggctgcgcagcgacttgcgccaacacgacaacactgccctggcggcc
gccgcagcgcgcggcccgaccgtggccgtgtacctgttgagcccgcagcaatggctggaa
catgacgatgcgccgtgcaaggtggatttctggctgcgcaacctgcgcgagctgagccac
agtctcggcgcgctgaacatcccgctgttgattcgcagcgcagcgcactgggaccaggcg
ccggcagaactgctcaagctctgccggcaattgaagatcgaagcggttcacgtcaacgag
gaatacggcgttcatgaaagccgtcgcgatgaagccgtggccgaaacgttgcgggccgag
ggcatcgaattccacagttatctggatcagttgctgttcaaacccggcaccgtgctgacc
agaaccggtacttactttcaggtcttcagccagttccgcaaagtctgctacgaacgcctg
cacggttcgctgccgtcacggctcaaggcaccgggcaaacaggctgcgctgaacatcgcc
agcgatgcgattcccgacgaggtcaaaggcttcgccacgccgagcgaatcgctgcgcgca
ttgtggccggccggcgaagaagaagcgcgacgccgtctcgataccttcaccgatgcgcag
atcgactattaccagagcgaacgcgactttccggccaagcccggcaccagccagctctcg
ccttatctggccgccggggtgatctcgccacgccagtgcctgcacgccgcgctgcacagc
aatcagggcgagttcgaaagcggcaaggtcggcgcggtcacctggatcaacgaactgctg
tggcgcgagttctacaaacacatcctggtcggctatccgcgagtttcgcggcaccgcgcc
ttccgcccggaaaccgaagcgctggcatggcgtaacgcgccggaggatttgaaggcttgg
caagaggcacgcaccggcctgccgatcatcgacgcagcgatgcgccaattgctcgaaacc
ggctggatgcataaccgcctgcgcatggtggtggcgatgttcctgaccaaaaacctgctg
atcgactggcgcgaaggcgaacgttttttcatgcgccacctgatcgatggtgatctggcg
gcgaacaacggtggctggcaatggagctcgtcgaccggcaccgactcagcgccgtacttc
cgcattttcaacccggtcagccagtcggaaaagttcgacgccgaaggcgtgttcatcaag
cactggctgccggaactggctgggctcaacaagaagcaagtacacaacccggccagcgct
ggagggctgttcggcgtagcggattatccggcgccgatcgtcaacctcggcgcttcacgc
gaccgcgcgctgacggcgttcaagaatctgccgtcgcgccagtctgccggagccgtcaat
gagtga
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