Pseudomonas hamedanensis: HU739_024920
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Entry
HU739_024920 CDS
T07661
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
phv
Pseudomonas hamedanensis
Pathway
phv02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
phv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HU739_024920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
phv02022
]
HU739_024920
02035 Bacterial motility proteins [BR:
phv02035
]
HU739_024920
Two-component system [BR:
phv02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
HU739_024920
Bacterial motility proteins [BR:
phv02035
]
Pilus system
Twitching motility proteins
HU739_024920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
HTH_50
HTH_30
AAA_16
Pre_tape_measure
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QXI17092
UniProt:
A0A9E6TGH2
LinkDB
All DBs
Position
5685943..5687289
Genome browser
AA seq
448 aa
AA seq
DB search
MTTSPRQKILIVDDEPDIRELLEITLGRMKLDTLSARNLGEAQALLQRERFDLCLTDMRL
PDGTGLDLVQHIQQRYPQLPVAMITAYGSLETAINALKAGAFDFLTKPVDLTRLRELVAT
ALRMPVAGGASSPIDRRLLGDSLPMRNLRKQIDKLARSQAPVYISGESGSGKELVARLIH
EQGPRAQQPFVPVNCGAIPSELMESEFFGHRKGSFTGAVEDKPGLFQAAHGGTLFLDEVA
DLPLSMQVKLLRAIQEKAVRSIGGQQETVVDVRILSATHKDLDAQVSAERFRQDLYYRLN
VIELRVPSLRERRDDIEVLAAHVLKRLARDTGQPVASLHPQALESLKNYRFPGNVRELEN
VLERAHTLCENRIIESQDLRLSEGNCAAEGAIADLTQIDNLEDYLENVERKLILQALEET
RWNRTAAAQRLSLSFRSMRYRLKKLGLD
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
ttgactacgagcccacggcaaaaaattcttatcgtcgacgacgaaccggatatccgcgaa
ctcctggaaatcacactgggacggatgaaactcgataccctcagtgcgcgcaacctgggt
gaggcccaggcgctgctgcagcgtgagcgtttcgatctgtgcctgaccgacatgcgcctg
cccgacggcacggggctggacttggtgcagcacatccagcaacgttatccacagctcccg
gtggcgatgatcaccgcctatggcagtctggagactgcgatcaacgcgctgaaggccggg
gccttcgactttctgaccaagccggtcgacctcacgcgcctgcgcgaactggtcgccacg
gccctgcgcatgccggtggcgggcggcgcgagcagcccgatcgaccgacgcctgctcggc
gactcgttgcccatgcgcaacctgcgcaagcagatcgacaaactcgcccgcagccaggcg
ccggtgtacatcagcggtgaatcgggcagcggcaaggaactggtcgcacgcctgattcat
gagcagggcccgcgcgcccagcagccctttgtcccggtcaattgcggggcgattccctcg
gagttgatggaaagcgagtttttcggccaccgcaaaggcagttttaccggtgcagtggag
gacaaaccggggctgttccaggccgcccatggcggcacgctgtttctcgatgaagtggcg
gatctgccgttatcgatgcaggtcaaactgctgcgggcgattcaggaaaaggccgtgcgc
agcatcggcggccagcaggaaaccgtggtcgatgtgcgcatcctcagcgcgacgcacaag
gaccttgatgcgcaggtcagcgccgaacggtttcgccaggacctttattaccgattgaac
gtgatcgaactgcgcgtaccctctctgcgcgagcgccgcgatgacattgaagtgctggcc
gcgcatgtcctcaagcgattggccagggacaccggccagcctgtcgcgagcctgcatccg
caggcgctggaaagcctgaagaattaccgcttccccgggaacgtgcgggaactggagaac
gtacttgaacgggcgcataccctgtgcgagaaccgtatcatcgaatctcaggacttgcgg
ctgagcgaaggcaattgcgcggcggagggtgcgattgccgaccttacgcagatcgacaac
ctggaagattatctggaaaacgtcgaacgcaagctgatcctgcaggcattggaggagaca
cgctggaaccgcacggccgcggcgcagcgcttgagtctttcgttcaggtcgatgcgctat
cggctgaagaaattgggcctggattga
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