Pseudomonas hamedanensis: HU739_025610
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Entry
HU739_025610 CDS
T07661
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
phv
Pseudomonas hamedanensis
Brite
KEGG Orthology (KO) [BR:
phv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phv03000
]
HU739_025610
Transcription factors [BR:
phv03000
]
Prokaryotic type
Helix-turn-helix
Other families
HU739_025610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
GAF
AAA_5
PAS_4
AAA_2
HTH_23
HTH_7
PAS_9
HTH_50
AAA
HTH_30
PAS_8
HVO_A0261_N
HTH_22
HTH_17
RWP-RK
Diguanyl_cycl_sensor
Mg_chelatase
HTH_20
AAA_16
HTH_28
Enkurin
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QXI17221
UniProt:
A0A9E6P0B5
LinkDB
All DBs
Position
complement(5833437..5835347)
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AA seq
636 aa
AA seq
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MHDNHLSRHARQVLTVTQGKPHPHGPGADPSIARSWLRCLEDYHLDPSVTMAPTVLEHGR
VLESRERLQQVLQIAGTEMSSLHQQLSGAGHAVLLTDARGVILNCVTAPAERKIFERAGL
WLGADWSEACEGTNGIGTCLVERQALTIHQNEHFRGRHTGLTCSASPVFDPHGELMAVLD
VSSARPDVSRQSQFHTMALVNLSAKMIESCYFLRCFDNQWLLRFHLQAESVGLFSEGLLA
FDGEGRISAANQSALNLLGHVRGGLLGKPVEAFFDCSLDDLLGRASANASASWPLRTLDG
RHLFAVLRGESRKPTPVFATPIATPAPRLSGICLGDEALQADFRKALRVFERDVPLLING
ETGSGKEAFAKAVHQASQRSTHAFVALNCAAIPESLIESELFGYRGGSFTGARKDGMRGK
LQQADGGTLFLDEIGDMPLALQTRLLRVLEDRQVVPIGGEPEAVNVRIISATHRNLLERV
ADGSFREDLYYRLNGLEVALPALRERSDKAQLLDFLLAEEAGGETILIDEPARQALLAFN
WPGNVRQLRNVLRTLAALCDGGRVGVEDLPVMIRQARPAVLAQESCAQPLDDAERLALLN
ALEQARWHMTHTAEQLGVSRNTLYRKLRKHGIARSA
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacaaccatttgagtcgccacgcccgtcaggttctcactgtcacccagggcaag
ccgcacccgcacggccccggtgccgatccgtcgatcgcccgctcgtggctgcgctgtctt
gaggactatcacctcgatccttcggtgaccatggcgccgaccgtgctcgaacacggccgg
gtgctggaaagtcgcgagcgcttgcagcaagtcctgcagatcgccggtacggaaatgagc
agtctgcatcaacaactctccggcgccggccacgcggtgctgctgaccgatgcccgcggg
gtgatcctcaactgcgttaccgccccggccgaacggaagattttcgagcgcgccgggctt
tggctcggcgccgactggagcgaggcctgcgagggcaccaacggcatcggcacctgcctg
gtcgagcgccaggcgctgactattcatcaaaacgagcactttcgcggccgtcacaccggg
ctgacttgttcggcgagcccggtgttcgatccgcatggcgaactgatggcggtactcgac
gtgtcctcggcgcgcccggacgtctcgcgccagagccagttccacactatggcgctggtc
aatctgtcggcaaagatgattgaaagctgttacttcctgcgctgtttcgacaatcaatgg
ttgctgcgttttcatttgcaggccgagtccgtcggcttgttcagcgaagggctgctggcg
tttgacggcgaagggcggatcagtgcagcgaatcagagcgcgttgaacctgctcgggcat
gttcgcggtggtttgctgggaaaacccgtcgaggcgtttttcgattgttcgctggatgac
ctgcttggccgagcgagtgccaatgccagcgccagttggccgctgcgcaccctcgacgga
cgccatctgttcgccgtgttgcgcggcgaatcgcgcaagccgacgccggttttcgccacg
ccgatcgcgacgcctgcgccacgtctgtccggcatctgccttggcgacgaggcattgcag
gccgatttccgcaaggccctgcgcgtgttcgagcgcgacgtgccgttgttgattaatggc
gagaccggctctggcaaggaagcgttcgccaaggctgtgcaccaggccagccagcgctcg
acccatgccttcgtcgccctcaattgcgcagccatcccggaaagcctgatcgagagcgaa
ctgtttggttatcgcggtggcagcttcaccggtgcgcgcaaggatggcatgcgcggcaag
ttgcagcaggccgacggcggcactttgttcctcgatgaaatcggtgacatgccgctggcc
ttgcagacccgtttgctgcgcgtgctggaggaccggcaggtggtgccgattggcggcgag
ccggaagcggtcaacgtgcggatcatcagcgctacccaccgcaatctgcttgagcgagtc
gcggacggcagcttccgcgaggatttgtattaccggctcaacgggctggaagtggcgttg
ccggcattgcgcgagcgcagtgacaaggcgcagttgctggattttctgttggctgaagag
gcgggcggcgaaaccatcctgatcgacgagccggcccgtcaggcattgctggcgttcaat
tggccgggcaatgtgcggcagttgcgcaatgtgctgcgcacgctggcagcgttgtgtgat
ggcgggcgggtcggggttgaggatttgccggtgatgattcggcaggcgcggccggcggtt
ttggcgcaggagtcttgcgcacagccgctggacgatgccgaaaggctggcgctgctcaat
gcactggaacaggcacgctggcacatgacgcacacggctgagcaactgggcgtgagccga
aatacgctgtatagaaagctgcgcaaacacggcatcgcccgctctgcctga
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