Pseudomonas hamedanensis: HU739_025955
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Entry
HU739_025955 CDS
T07661
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
phv
Pseudomonas hamedanensis
Pathway
phv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
phv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HU739_025955 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phv03400
]
HU739_025955 (uvrA)
DNA repair and recombination proteins [BR:
phv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HU739_025955 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HU739_025955 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
nSTAND1
AAA_16
BCA_ABC_TP_C
AAA_23
AAA_21
RsgA_GTPase
DnaJ_CXXCXGXG
Viral_helicase1
nSTAND3
cobW
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QXI17289
UniProt:
A0A9E6NZM9
LinkDB
All DBs
Position
5907434..5910268
Genome browser
AA seq
944 aa
AA seq
DB search
MDKILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTPRC
PDHDIPLEAQTVSQMVDLVLAQPEGSKLMLLAPVIRERKGEHLSVFEELRAQGFVRARVN
GRICELDELPKLDKQKKHSIDVIVDRFKVRADLQQRLAESFETALKLADGIALVAPMDDE
PGEEMIFSARFACPICGHAISELEPKLFSFNNPAGACPTCDGLGVKQFFDIKRLVNGDLT
LAEGAIRGWDRRNVYYFQMLGSLASHYGFSLEKPFNELPADQQKFILHGSGSQNVNFKYL
NDRGDIVKRSHPFEGIVPNLERRYRETESASVREELTKFLSHQACPDCRGTRLRREARHV
WVGEKTLPAVTNLPIGDACEYFGALKMTGRRGEIADKILKEIRERLQFLVNVGLDYLSLD
RSADTLSGGEAQRIRLASQIGAGLVGVLYILDEPSIGLHQRDNDRLLGTLKHLRDIGNTV
IVVEHDEDAIRLADYVVDIGPGAGVHGGQIVAEGTPAEVMAHPDSLTGKYLSGRVKIEVP
AKRTPRNKKLTLSLKGARGNNLRNVDLEIPIGLLTCVTGVSGSGKSTLINNTLFPLSATA
LNGATTLEAAAHDSIKGLEHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAGVPES
RSRGYGPGRFSFNVKGGRCEACQGDGLIKVEMHFLPDIYVPCDVCKSKRYNRETLEIKYK
GKSIHETLEMTIEEAREFFDAVPALARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKLS
RELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADWL
VDLGPEGGSKGGQIIATGTPEEVAEMKQSHTGHYLKPLLIRDRA
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
ttggacaagatcctgatacgtggggcccgtacccacaacctgaagaacatcgacctgacc
ctgccacgggacaaactgatcgtcatcaccggcctgtccggatccggcaagtcgtccctg
gcgttcgacacgctgtatgccgaaggtcagcgtcgctatgtcgaatcgctgtcggcctac
gcccgccagttcctgtcgatgatggaaaaacccgacgtcgacaccatcgaaggcctgtcg
ccggcgatctccatcgaacagaagtcgacctcgcataacccgcggtccacggtcggcacc
atcaccgaaatctacgactacctgcgcctgctctatgcacgcgtcggtacgccacgctgc
ccggatcacgatatcccgctggaagcgcagaccgtcagccaaatggtcgatctggtactg
gcccagcccgaaggcagcaagctgatgctgctggccccggtgatccgcgagcgcaagggc
gaacacctctcggtcttcgaagagctgcgtgcgcaaggcttcgttcgcgcccgggtcaat
ggacggatctgcgagctcgacgagttgccgaagctggataaacagaagaagcattcgatc
gatgtgatcgtcgaccgcttcaaggtccgcgccgatctgcagcagcgcctcgcggagtca
ttcgaaaccgcgctgaagctggccgacggcattgccctggtcgcgccgatggacgacgag
ccgggcgaggaaatgatcttctccgcgcgcttcgcctgcccgatctgtggccatgcgatc
agcgagctggaacccaagctgttttccttcaacaacccggccggtgcctgcccgacctgc
gatggcctgggcgttaaacagttctttgatatcaagcgactggtcaacggcgacctgacc
ctcgccgagggcgcgattcgtggctgggacaggcgtaacgtctattacttccagatgctc
ggctcgttggcttcgcattacggtttcagcctggagaagcccttcaacgaactgccggcc
gaccagcagaaattcattctgcacggcagcggttcgcagaacgtcaatttcaaatacctg
aacgaccgtggcgatatcgtcaagcgctcgcacccgttcgaaggcatcgtgccgaatctg
gaacgccgctaccgcgaaaccgaatcggcgagcgtgcgcgaagagctgaccaagttcctc
agccatcaggcctgcccggattgccgcggcacccgtctgcgtcgtgaagcacggcatgtg
tgggtgggcgagaaaaccctgccggcggtgaccaatctgcccatcggcgatgcctgcgaa
tacttcggcgccctgaagatgaccgggcggcgcggcgagattgccgacaagattctcaag
gagatccgcgagcgcttgcagttcctcgtcaacgtgggcctggattacctgtcgctggat
cgcagcgccgacacgctgtccggaggcgaggcgcagcggattcgtctggccagccagatc
ggtgccggcctcgtcggggtcttgtacatcctcgacgaaccgtcgattggtttgcaccaa
cgggacaacgaccgtttgctgggcacgctcaagcatctgcgtgacattggcaacaccgtg
attgtggtcgagcatgacgaagacgcgattcgtctggccgactatgtcgtggatatcggc
ccgggggccggtgtgcacggcggccagattgtcgccgaaggcacgccggccgaagtcatg
gcccacccggactccctgaccggtaaatatctgtcgggccgggtcaagatcgaagtgccc
gccaagcgcacgccgcgcaacaagaagctgacgctgtcgctcaagggcgcacgcggcaac
aacctgcgcaacgtcgaccttgaaatcccgattggtctgctgacctgcgtcaccggcgta
tccggctcgggcaaatcgacactgatcaacaatacgctgttcccgctcagtgccacggca
ctcaatggcgcgaccacgctggaagctgcggctcacgacagcatcaagggcctggagcat
ctggacaaggtcgtcgatatcgaccagagccctatcggtcgtactccacgctccaacccg
gcgacttataccggactgttcacacccatccgcgaactgttcgctggcgttcccgaatcg
cgctcccgtggctacggcccagggcgcttctcattcaacgtcaagggcgggcgctgtgag
gcgtgccagggcgacggcttgatcaaggtagaaatgcactttctgccggacatctacgtg
ccttgcgatgtgtgcaagagcaagcgctacaaccgcgagacccttgagatcaaatacaag
ggcaagagcatccacgaaaccctcgaaatgaccatcgaggaggcccgggagttcttcgac
gcggtgccggcgctggcgcgcaagctgcaaaccttgatggatgtcggcctgtcgtacatc
aagctcgggcagtcggcgacaaccttgtccggtggtgaggcgcagcgggtcaaactgtcg
cgcgagctgtccaagcgtgacaccggcaagaccctgtacatcctcgacgagccgaccacc
ggcctgcacttcgcggacatccagcaattgctcgacgtcctgcatcgcctgcgcgaccac
ggcaacaccgtggtggtgatcgaacacaacctcgacgtgatcaagaccgctgactggctg
gtagacctcggtcctgaaggcggttccaagggcggtcagatcatcgctaccggtacgccg
gaggaagtggccgagatgaagcaatctcatactggccactacctcaagccactgctgatc
cgcgaccgcgcttaa
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