Phycicoccus sp. HDW14: G7075_01030
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Entry
G7075_01030 CDS
T06484
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
phw
Phycicoccus sp. HDW14
Pathway
phw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
phw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G7075_01030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phw03021
]
G7075_01030
03400 DNA repair and recombination proteins [BR:
phw03400
]
G7075_01030
Enzymes [BR:
phw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G7075_01030
Transcription machinery [BR:
phw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G7075_01030
DNA repair and recombination proteins [BR:
phw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G7075_01030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
SLATT_2
Motif
Other DBs
NCBI-ProteinID:
QIM20052
UniProt:
A0A6G8FV85
LinkDB
All DBs
Position
204147..208034
Genome browser
AA seq
1295 aa
AA seq
DB search
MLDVNFFDELRIGLATADSIRAWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
ACGKYKRVRFKGIICERCGVEVTRAAVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVDEDQRHADLPSLEAQIQVEKKEIENRRDADVEARAKKLEND
IAALEAEGAKSDAKRKVRDSAEREMNAIRRRADATVERLEQVWDRFRNLKVQDLEGDEVL
YREMRDRFGLYFEGGMGAAAIQKRLETFDLDAESESLRETIATGKGQRKTRALKRLKVVS
AFQTTTNQPSGMVLDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLDHAQNIKSAKRMVERQR
PVVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHVPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMIIGLYHLTSEVEDGKGAGR
VFNSVFEARMAFDGGEIELGSRVRIRLEHLVPTPLSELPEGVEVDADGYVQTLTVETTLG
RALFNETLPMDYPFVNDQVDKKRLSTIVNDLAERYSKVQVAASLDALKEYGFHWATRSGT
TVAISDVVTPPRKLEILDGYETKATKVQTQYERGLITDDERRQELIEIWTQATNEVAKEM
EANIPKTNTIYKMVSSGARGNWMQLRQIAGMRGLVSNPKGDIIPRPIRANFREGLTVLEF
FISTHGSRKGLADTALRTADSGYLTRRLVDVSQDVIIREDDCGTERGLPMPIAATDERTG
NRAVHDDVETSVYARSLAEDVVKDGEVLAEAGIDLGDVVIGALFAAGVDSVKVRSVLTCD
SKVGTCAKCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGL
PRVVELFEARTPKGVSPIAEASGRVTIEETDKARRILLTPDDGSEEHAYPVTKRARLLVQ
DGQHVEVGAQLTQGSIDPKQVLRILGPRKTQEHLVDEVQNVYRQQGVSIHDKHIEVIVRQ
MLRRITIIESGDADLLPGMLAERGRFEEENRRVVAEGLKPASGRPELMGITKASLATESW
LSAASFQETTRVLTEAAMEGKSDSLLGLKENVILGKLIPAGTGLPRYRNIAVEPTEEAKA
AMYSMPNYEDYAFSFGPGSGEAVRLDDSELGLDRL
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctccggatcggcctcgccaccgccgactccatc
cgtgcctggagccacggtgaggtcaagaagcccgagacgatcaactaccgcaccctcaag
cccgagaaggacggcctcttctgcgagaagatcttcggccccacccgggactgggagtgc
gcctgcggcaagtacaagcgggtccgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtgacccgtgcggccgtccgtcgtgagcggatgggccacatcgagctcgccgccccc
gtcacccacatctggtacttcaagggtgtcccgagccgtctcgggtacctgctcgacctg
gccccgaaggacctcgagaaggtcatctacttcgcggcctacatgatcacctccgtcgac
gaggaccagcggcacgccgacctcccgtcgctcgaggcccagatccaggtcgagaagaag
gagatcgagaaccgtcgcgacgccgacgtcgaggcccgggccaagaagctcgagaacgac
atcgccgcgctcgaggccgagggcgccaagtccgacgccaagcgcaaggtccgcgactcc
gcggagcgcgagatgaacgcgatccgccgtcgcgccgacgccaccgtcgagcgcctcgag
caggtctgggaccgcttcaggaacctcaaggtccaggacctcgagggcgacgaggtcctc
taccgcgagatgcgcgaccgcttcggcctgtacttcgagggcggcatgggtgccgccgcg
atccagaagcggctcgagaccttcgacctcgacgccgagtccgagtcgctgcgcgagacc
atcgccaccggcaagggccagcgcaagacccgtgccctcaagcggctcaaggtcgtctcg
gcgttccagaccacgaccaaccagccctcgggcatggtcctggacgccatcccggtcatc
ccgccggacctgcgcccgatggtgcagctcgacggtggccgcttcgcgacctccgacctc
aacgacctgtaccgacgggtcatcaaccggaacaaccgcctcaagcgactgctcgacctc
ggtgcccccgagatcatcgtcaacaacgagaagcggatgctccaggaggccgtcgacagc
ctcttcgacaacggccgtcgtggtcgcccggtcacgggccccggcaaccgtccgctgaag
tcgctgtccgacatgctcaagggcaagcagggccggttccgccagaacctgctcggcaag
cgcgtcgactactccggccgttcggtcatcgtcgtcggcccgcagctcaagctgcaccag
tgcggcctgcccaagcagatggccctcgagctcttcaagcccttcgtcatgaagcggctc
gtcgacctcgaccacgcgcagaacatcaagtccgccaagcggatggtcgagcgccagcgc
ccggtcgtgtgggacgtgctcgaggaggtcatcaccgagcacccggtgctgctcaaccgc
gcacccacgctgcaccgcctcggcatccaggccttcgagccgcagctcgtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacgtgccgctgtcggcggaggcccaggccgaggcccgcatcctcatgctg
tcctcgaacaacatcctcaagccggccgacggccgccccgtgaccatgcccacccaggac
atgatcatcggcctctaccacctcacctccgaggtcgaggacggcaagggcgccggacgc
gtgttcaacagcgtcttcgaggcccggatggcgttcgacggcggcgagatcgagctcggc
tcccgggtccggatccggctggagcacctcgtgccgacgccgctgtccgagctgcccgag
ggcgtcgaggtcgacgccgacggctacgtgcagaccctgacggtcgagaccaccctcggt
cgcgcgctcttcaacgagacgctgccgatggactacccgttcgtcaacgaccaggtcgac
aagaagcgcctgtcgacgatcgtcaacgacctcgccgagcggtacagcaaggtgcaggtc
gcggcgagcctcgacgcgctcaaggagtacggcttccactgggcgacccgctcgggcacc
acggtcgccatctccgacgtcgtcacgcctccgcgcaagctcgagatcctcgacggctac
gagaccaaggccacgaaggtccagacgcagtacgagcgcggtctgatcaccgacgacgag
cgccgtcaggagctcatcgagatctggacgcaggccacgaacgaggtcgccaaggagatg
gaggccaacatcccgaagaccaacaccatctacaagatggtgtcctcgggtgctcgcggt
aactggatgcagctgcgccagatcgccggtatgcgtggcctggtgtcgaacccgaagggc
gacatcatcccgcggccgatccgcgcgaacttccgcgagggcctcaccgtgctcgagttc
ttcatctcgacgcacggctcgcgcaagggcctggccgacaccgcgctgcgcaccgccgac
tcgggctacctcacccgtcgcctcgtcgacgtgtcgcaggacgtcatcatccgtgaggac
gactgcggcaccgagcgcggcctgccgatgcccatcgccgccaccgacgagcgcacgggc
aaccgtgcggtccacgacgacgtcgagacctcggtctacgcgcgctcgctcgccgaggac
gtcgtcaaggacggcgaggtcctcgccgaggccggcatcgacctcggggacgtcgtcatc
ggcgcgctcttcgcggccggcgtcgactcggtgaaggtccgttcggtcctcacctgcgac
tccaaggtcgggacctgcgccaagtgctacggccgttcgctggccaccggcaagctcgtc
gacatcggtgaggccgtcggcatcatcgcggcgcagtccatcggtgagcccggcacccag
ctgacgatgcgcaccttccacaccggtggtgtggccggtgacgacatcacgcagggtctg
ccgcgtgtcgtcgagctcttcgaggcgcgcacccccaagggtgtctcgccgatcgccgag
gcctccggccgcgtgacgatcgaggagaccgacaaggcccgtcgcatcctgctcacgccg
gacgacggctccgaggagcacgcctacccggtgacgaagcgggcccgcctgctcgtccag
gacggccagcacgtcgaggtcggtgcgcagctgacgcaggggtcgatcgaccccaagcag
gtgctgcgcatcctcggcccgcgcaagacgcaggagcacctcgtcgacgaggtgcagaac
gtgtaccgccagcagggcgtgtcgatccacgacaagcacatcgaggtcatcgtccggcag
atgctgcgccggatcacgatcatcgagtcgggcgacgccgacctgctgccgggcatgctc
gccgagcgtgggcgcttcgaggaggagaaccgtcgcgtcgtcgccgagggcctcaagccg
gcctcgggtcgtcccgagctcatgggcatcaccaaggcctcgctcgcgaccgagtcgtgg
ctgtcggcggcctccttccaggagaccacccgcgtcctcaccgaggccgccatggagggc
aagtccgactccctcctcggcctcaaggagaacgtcatcctcggcaagctcatcccggcg
ggcaccggcctgccgcgctaccgcaacatcgcggtggagcccaccgaggaggccaaggcc
gccatgtactccatgccgaactacgaggactacgcgttctcgttcggcccggggtcgggc
gaggccgtccgcctcgacgacagcgagctcggtctcgaccggctctga
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