KEGG   Phycicoccus sp. HDW14: G7075_07340
Entry
G7075_07340       CDS       T06484                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
phw  Phycicoccus sp. HDW14
Pathway
phw03030  DNA replication
phw03410  Base excision repair
phw03420  Nucleotide excision repair
phw03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:phw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    G7075_07340 (polA)
   03410 Base excision repair
    G7075_07340 (polA)
   03420 Nucleotide excision repair
    G7075_07340 (polA)
   03440 Homologous recombination
    G7075_07340 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:phw03032]
    G7075_07340 (polA)
   03400 DNA repair and recombination proteins [BR:phw03400]
    G7075_07340 (polA)
Enzymes [BR:phw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     G7075_07340 (polA)
DNA replication proteins [BR:phw03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     G7075_07340 (polA)
DNA repair and recombination proteins [BR:phw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     G7075_07340 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     G7075_07340 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 DNA_pol_A_exo1 baeRF_family2 DNA_pol_lambd_f HHH_5 IMS_HHH HHH
Other DBs
NCBI-ProteinID: QIM20988
UniProt: A0A6G8FXB1
LinkDB
Position
complement(1485660..1488374)
AA seq 904 aa
MVVRLPRVKLLLLDGHSLAYRAFFALPVENFSTSTGQHTNAVYGFTSMLINVLRDEAPTH
VCVAFDVSRQTFRLEEYSEYKAGRSKTPTEFSGQLPLLREVLDALRIKHIGLEGYEADDV
IASLTRQATEAGAEVVICTGDRDAFQLVTEKVSLIYPVRGVSEVWRMDPAAVEEKYLVPP
NRYSDLAALVGESSDNLPGVPGVGPKTAAKWLAQYGDLTGVVAHVDEIKGKAGENLRAHL
DGVLRNRRLNKLVDDLELPLTVADLERASWDREEVHQVFDGLEFRVLRDRLFQTFDVESD
EVEGGFELDGDVFTADDLTVRFGDGAVGRTVPHGVVVSGHYRAGEGDAGAVALAGDDGAT
AYLDLTALTAEQEQALAGWLADPDAPKVLHDVKPQLQALRARGLALNGVTSDTALAAYLV
RPDQRSYDLEDLVVRHLGRELTAEGGATSDQGRQGTLTFDVETDDDTAERDAMVRARAVL
ELSAVLAEKVEETGGTELLADLELPLVDILAEMERTGIAVDEDALTDLEADFAAKMRQAQ
QDAYDAIGREDVNLGSPKQLQEVLFDQLGMPKTKRTKTGYTTDADALADLFTKTEHPFLE
ALLRHRDTSRLRVTVEGLIKSVAPDRRIHTTYLQTIAATGRLSSTDPNLQNVPIRTEEGR
RIRDVFVVGEAFESLMSADYSQIEMRIMAHLSGDEGLIEAFRTGEDLHRFVGARVFGVEP
EDVTLEMRSKVKAMSYGLAYGLSAFGLSKQLTIGTGEAQGLMDEYFARFGGVRDYLREVV
VEARATGYTATMLGRRRYLPDLLSDNRQRREGAERMALNAPIQGSAADIIKLAMKGVDAA
LKAEGATSRMLLQVHDELVLEVAPGERADVEALVRREMGAAIDLGDVPLDVSVGVGRSWH
DAAH
NT seq 2715 nt   +upstreamnt  +downstreamnt
atggtcgttaggctgccacgcgtgaagctcctcctcctcgacggacactcgctggcctac
cgggcgttcttcgccctccccgtcgagaacttctcgacgagcaccgggcagcacaccaac
gccgtctacggcttcacctcgatgctcatcaacgtcctgcgcgacgaggcgcccacccac
gtctgcgtcgccttcgacgtctcgcgccagaccttccgcctcgaggagtacagcgagtac
aaggccggccgctccaagacgcccaccgagttctccggccagctgcccctgctgcgcgag
gtgctcgacgcgctgcgcatcaagcacatcggcctcgaggggtacgaggccgacgacgtc
atcgcctccctgacccggcaggccaccgaggccggcgccgaggtcgtcatctgcaccggc
gaccgcgacgccttccagctcgtcaccgagaaggtcagcctcatctacccggtccgtggc
gtctccgaggtctggcggatggaccccgccgccgtcgaggagaagtacctcgtccccccg
aaccgctacagcgacctcgcggccctcgtcggcgagtccagcgacaacctccccggcgtc
cccggcgtcggtccgaagaccgcggccaagtggctcgcccagtacggcgacctcaccggc
gtcgtcgcccacgtcgacgagatcaagggcaaggccggcgagaacctgcgcgcccacctc
gacggcgtgctgcgcaaccgcaggctcaacaagctcgtcgacgacctcgagctgccgctc
accgtcgccgacctcgagcgcgcctcctgggaccgcgaggaggtccaccaggtcttcgac
ggcctcgagttccgcgtcctgcgcgaccggctcttccagaccttcgacgtcgagtccgac
gaggtcgagggcggcttcgagctcgacggcgacgtgttcaccgccgacgacctcaccgtg
cgcttcggcgacggcgccgtggggcgcaccgtcccgcacggggtcgtcgtgtccgggcac
taccgggcgggcgagggcgacgcgggggccgtcgcgctggccggcgacgacggcgccacg
gcctacctcgacctcaccgcgctcaccgccgagcaggagcaggccctcgccgggtggctc
gccgaccccgacgcgcccaaggtcctccacgacgtcaagccccagctccaggccctgcgg
gcgcgcgggctggccctcaacggcgtcaccagcgacaccgccctcgccgcctacctcgtg
cgccccgaccagcgctcctacgacctcgaggacctcgtcgtgcgccacctcggccgcgag
ctgaccgcggagggcggcgcgacgagcgaccagggccgccagggcacgctgaccttcgac
gtcgagaccgacgacgacaccgccgagcgcgacgcgatggtgcgcgcccgggccgtcctc
gagctgtcggccgtcctcgccgagaaggtcgaggagaccggcggcaccgagctgctcgcc
gacctcgagctgccgctcgtcgacatcctcgccgagatggagcgcaccggcatcgccgtc
gacgaggacgccctcaccgacctcgaggccgacttcgcggcgaagatgcgccaggcccag
caggacgcctacgacgccatcggccgcgaggacgtcaacctcggcagcccgaagcagctc
caggaggtgctcttcgaccagctcggcatgccgaagaccaagcgcaccaagaccggctac
accaccgacgccgacgcgctcgccgacctgttcaccaagaccgagcacccgttcctcgag
gcgctgctgcgccaccgcgacaccagccggctgcgggtcaccgtcgaggggctcatcaag
tcggtcgcccccgaccggcgcatccacacgacgtacctgcagaccatcgcggccaccggg
cggctgtcctccaccgacccgaacctccagaacgtgcccatccgcaccgaggagggccgg
cgcatccgcgacgtgttcgtcgtcggcgaggccttcgagtcgctgatgtcggccgactac
agccagatcgagatgcggatcatggcccacctctccggcgacgaggggctcatcgaggcc
ttccgcaccggtgaggacctccaccgcttcgtcggcgcccgggtcttcggcgtcgagccc
gaggacgtcaccctcgagatgcgcagcaaggtcaaggcgatgagctacggcctcgcctac
ggtctctcggcgttcggcctgtccaagcagctgaccatcggcaccggtgaggcgcagggc
ctcatggacgagtacttcgcccgcttcggcggcgtccgcgactacctgcgcgaggtcgtc
gtcgaggcccgggccacgggctacaccgcgacgatgctcggccggcgccgctacctcccc
gacctgctgagcgacaaccggcagcgccgcgagggcgccgagcggatggccctcaacgcc
ccgatccagggctcggccgccgacatcatcaagctggcgatgaagggcgtcgacgccgcg
ctcaaggccgagggcgccaccagccggatgctgctccaggtgcacgacgagctcgtcctc
gaggtcgccccgggggagcgggccgacgtcgaggccctcgtccggcgcgagatgggtgcc
gccatcgacctcggcgacgtgcccctcgacgtcagcgtcggggtcggccgctcctggcac
gacgccgcgcactga

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