Phycicoccus sp. HDW14: G7075_07340
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Entry
G7075_07340 CDS
T06484
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
phw
Phycicoccus sp. HDW14
Pathway
phw03030
DNA replication
phw03410
Base excision repair
phw03420
Nucleotide excision repair
phw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G7075_07340 (polA)
03410 Base excision repair
G7075_07340 (polA)
03420 Nucleotide excision repair
G7075_07340 (polA)
03440 Homologous recombination
G7075_07340 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phw03032
]
G7075_07340 (polA)
03400 DNA repair and recombination proteins [BR:
phw03400
]
G7075_07340 (polA)
Enzymes [BR:
phw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G7075_07340 (polA)
DNA replication proteins [BR:
phw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
G7075_07340 (polA)
DNA repair and recombination proteins [BR:
phw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
G7075_07340 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G7075_07340 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
baeRF_family2
DNA_pol_lambd_f
HHH_5
IMS_HHH
HHH
Motif
Other DBs
NCBI-ProteinID:
QIM20988
UniProt:
A0A6G8FXB1
LinkDB
All DBs
Position
complement(1485660..1488374)
Genome browser
AA seq
904 aa
AA seq
DB search
MVVRLPRVKLLLLDGHSLAYRAFFALPVENFSTSTGQHTNAVYGFTSMLINVLRDEAPTH
VCVAFDVSRQTFRLEEYSEYKAGRSKTPTEFSGQLPLLREVLDALRIKHIGLEGYEADDV
IASLTRQATEAGAEVVICTGDRDAFQLVTEKVSLIYPVRGVSEVWRMDPAAVEEKYLVPP
NRYSDLAALVGESSDNLPGVPGVGPKTAAKWLAQYGDLTGVVAHVDEIKGKAGENLRAHL
DGVLRNRRLNKLVDDLELPLTVADLERASWDREEVHQVFDGLEFRVLRDRLFQTFDVESD
EVEGGFELDGDVFTADDLTVRFGDGAVGRTVPHGVVVSGHYRAGEGDAGAVALAGDDGAT
AYLDLTALTAEQEQALAGWLADPDAPKVLHDVKPQLQALRARGLALNGVTSDTALAAYLV
RPDQRSYDLEDLVVRHLGRELTAEGGATSDQGRQGTLTFDVETDDDTAERDAMVRARAVL
ELSAVLAEKVEETGGTELLADLELPLVDILAEMERTGIAVDEDALTDLEADFAAKMRQAQ
QDAYDAIGREDVNLGSPKQLQEVLFDQLGMPKTKRTKTGYTTDADALADLFTKTEHPFLE
ALLRHRDTSRLRVTVEGLIKSVAPDRRIHTTYLQTIAATGRLSSTDPNLQNVPIRTEEGR
RIRDVFVVGEAFESLMSADYSQIEMRIMAHLSGDEGLIEAFRTGEDLHRFVGARVFGVEP
EDVTLEMRSKVKAMSYGLAYGLSAFGLSKQLTIGTGEAQGLMDEYFARFGGVRDYLREVV
VEARATGYTATMLGRRRYLPDLLSDNRQRREGAERMALNAPIQGSAADIIKLAMKGVDAA
LKAEGATSRMLLQVHDELVLEVAPGERADVEALVRREMGAAIDLGDVPLDVSVGVGRSWH
DAAH
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggtcgttaggctgccacgcgtgaagctcctcctcctcgacggacactcgctggcctac
cgggcgttcttcgccctccccgtcgagaacttctcgacgagcaccgggcagcacaccaac
gccgtctacggcttcacctcgatgctcatcaacgtcctgcgcgacgaggcgcccacccac
gtctgcgtcgccttcgacgtctcgcgccagaccttccgcctcgaggagtacagcgagtac
aaggccggccgctccaagacgcccaccgagttctccggccagctgcccctgctgcgcgag
gtgctcgacgcgctgcgcatcaagcacatcggcctcgaggggtacgaggccgacgacgtc
atcgcctccctgacccggcaggccaccgaggccggcgccgaggtcgtcatctgcaccggc
gaccgcgacgccttccagctcgtcaccgagaaggtcagcctcatctacccggtccgtggc
gtctccgaggtctggcggatggaccccgccgccgtcgaggagaagtacctcgtccccccg
aaccgctacagcgacctcgcggccctcgtcggcgagtccagcgacaacctccccggcgtc
cccggcgtcggtccgaagaccgcggccaagtggctcgcccagtacggcgacctcaccggc
gtcgtcgcccacgtcgacgagatcaagggcaaggccggcgagaacctgcgcgcccacctc
gacggcgtgctgcgcaaccgcaggctcaacaagctcgtcgacgacctcgagctgccgctc
accgtcgccgacctcgagcgcgcctcctgggaccgcgaggaggtccaccaggtcttcgac
ggcctcgagttccgcgtcctgcgcgaccggctcttccagaccttcgacgtcgagtccgac
gaggtcgagggcggcttcgagctcgacggcgacgtgttcaccgccgacgacctcaccgtg
cgcttcggcgacggcgccgtggggcgcaccgtcccgcacggggtcgtcgtgtccgggcac
taccgggcgggcgagggcgacgcgggggccgtcgcgctggccggcgacgacggcgccacg
gcctacctcgacctcaccgcgctcaccgccgagcaggagcaggccctcgccgggtggctc
gccgaccccgacgcgcccaaggtcctccacgacgtcaagccccagctccaggccctgcgg
gcgcgcgggctggccctcaacggcgtcaccagcgacaccgccctcgccgcctacctcgtg
cgccccgaccagcgctcctacgacctcgaggacctcgtcgtgcgccacctcggccgcgag
ctgaccgcggagggcggcgcgacgagcgaccagggccgccagggcacgctgaccttcgac
gtcgagaccgacgacgacaccgccgagcgcgacgcgatggtgcgcgcccgggccgtcctc
gagctgtcggccgtcctcgccgagaaggtcgaggagaccggcggcaccgagctgctcgcc
gacctcgagctgccgctcgtcgacatcctcgccgagatggagcgcaccggcatcgccgtc
gacgaggacgccctcaccgacctcgaggccgacttcgcggcgaagatgcgccaggcccag
caggacgcctacgacgccatcggccgcgaggacgtcaacctcggcagcccgaagcagctc
caggaggtgctcttcgaccagctcggcatgccgaagaccaagcgcaccaagaccggctac
accaccgacgccgacgcgctcgccgacctgttcaccaagaccgagcacccgttcctcgag
gcgctgctgcgccaccgcgacaccagccggctgcgggtcaccgtcgaggggctcatcaag
tcggtcgcccccgaccggcgcatccacacgacgtacctgcagaccatcgcggccaccggg
cggctgtcctccaccgacccgaacctccagaacgtgcccatccgcaccgaggagggccgg
cgcatccgcgacgtgttcgtcgtcggcgaggccttcgagtcgctgatgtcggccgactac
agccagatcgagatgcggatcatggcccacctctccggcgacgaggggctcatcgaggcc
ttccgcaccggtgaggacctccaccgcttcgtcggcgcccgggtcttcggcgtcgagccc
gaggacgtcaccctcgagatgcgcagcaaggtcaaggcgatgagctacggcctcgcctac
ggtctctcggcgttcggcctgtccaagcagctgaccatcggcaccggtgaggcgcagggc
ctcatggacgagtacttcgcccgcttcggcggcgtccgcgactacctgcgcgaggtcgtc
gtcgaggcccgggccacgggctacaccgcgacgatgctcggccggcgccgctacctcccc
gacctgctgagcgacaaccggcagcgccgcgagggcgccgagcggatggccctcaacgcc
ccgatccagggctcggccgccgacatcatcaagctggcgatgaagggcgtcgacgccgcg
ctcaaggccgagggcgccaccagccggatgctgctccaggtgcacgacgagctcgtcctc
gaggtcgccccgggggagcgggccgacgtcgaggccctcgtccggcgcgagatgggtgcc
gccatcgacctcggcgacgtgcccctcgacgtcagcgtcggggtcggccgctcctggcac
gacgccgcgcactga
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