Phycicoccus sp. HDW14: G7075_10480
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Entry
G7075_10480 CDS
T06484
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
phw
Phycicoccus sp. HDW14
Brite
KEGG Orthology (KO) [BR:
phw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phw03032
]
G7075_10480
03400 DNA repair and recombination proteins [BR:
phw03400
]
G7075_10480
Enzymes [BR:
phw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
G7075_10480
DNA replication proteins [BR:
phw03032
]
Prokaryotic type
DNA Topoisomerases
G7075_10480
DNA repair and recombination proteins [BR:
phw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G7075_10480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
CarbopepD_reg_2
Motif
Other DBs
NCBI-ProteinID:
QIM21452
UniProt:
A0A6G8FZ97
LinkDB
All DBs
Position
complement(2139802..2140806)
Genome browser
AA seq
334 aa
AA seq
DB search
MARLRRVSPRSAGWTRKRAGKGFSYRDAGGEALPAEQVERIRSLAIPPAWQDVWICPHPN
GHIQAIGTDAAGRRQYLYHPDWRTARDELKFDRVKAAGTRLAKAREAIVGDLAGEGMPLA
RAAATATRLLDLGYFRIGSDAYTDANGSFGLTTLERRHVRRQGSDLVFSFVGKSGIEHSI
TVSDPQVIDSLNYMRQRRGGSKRLLAYRGEAKWADLQAAAVNEYISQMVAEDLTAKDFRT
WHATVLAAVALAESPEPGSTVASRKRAVKAAVEEVSAYLGNTPTIARKSYIDPRVIDQYE
DGVTIAGTLRKRYRDDAKRQAAIEKAVARLIDGA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggttgcggcgggtgtccccgcggtcggcggggtggacccgcaagcgggcgggc
aaggggttctcctaccgcgatgccgggggtgaggcgctgcccgccgagcaggtcgagcgc
atccggtcgctggccatccccccggcgtggcaggacgtgtggatctgcccgcaccccaac
gggcacatccaggccatcggcaccgacgcggccgggcggcggcagtacctctaccacccg
gactggcggacggcccgcgacgagctgaagttcgaccgggtcaaggccgcgggcacccgg
ctggccaaggcgcgcgaggcgatcgtcggcgacctcgcgggggaggggatgcccctggcg
cgggccgcggcgacggcgacccggctgctcgacctcgggtacttccgcatcgggtccgac
gcctacaccgacgccaacggctcgttcgggctgacgacgctggagcgccggcacgtgcgc
cggcaggggtcggacctggtgttctcgttcgtcggcaagtcgggcatcgagcactcgatc
acggtcagcgacccgcaggtcatcgactcgctcaactacatgcggcagcggcggggcggg
tcgaagcggctgctggcctaccgcggcgaggcgaagtgggcggacctgcaggcggcggcg
gtcaacgagtacatctcgcagatggtcgccgaggacctgaccgccaaggacttccgcacc
tggcacgcgacggtgctcgcggcggtggcgctggcggagtcgccggagccggggtcgacg
gtggcgtcgcgcaagcgggcggtcaaggcggcggtcgaggaggtctcggcctacctcggc
aacacgccgaccatcgcccgcaagtcctacatcgacccccgcgtcatcgaccagtacgag
gacggcgtgacgatcgccgggacgctgcgcaagcggtaccgagacgacgccaagcgccag
gcggccatcgagaaggccgtggcacggctcatcgacggcgcctga
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