Phycicoccus sp. HDW14: G7075_15920
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Entry
G7075_15920 CDS
T06484
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
phw
Phycicoccus sp. HDW14
Brite
KEGG Orthology (KO) [BR:
phw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phw03021
]
G7075_15920
Transcription machinery [BR:
phw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
G7075_15920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
KORA
PhyR_sigma-like
HTH_3
DUF7440
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QIM22279
UniProt:
A0A6G8G1C9
LinkDB
All DBs
Position
3227273..3228118
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AA seq
281 aa
AA seq
DB search
MTRPLPAHRTPTAPRALTCVPLPGSSAVQRPEHPGSDLETLLATYERASNPADRDRLLAD
VVAATMPLADSLALRYTGRGIDTEDLIQVARTALVGAVQRYRPGAGRGFEAFAVPTVRGE
LKRHFRDAGWMVRPPRGLQELRAELVPAEDELRQRLGRDATLTELAAAVGREGSDVAEAR
ATASAFTPASLDAPTPSGGTAGERLADPVDVADGVLLRAVVRAEVARLTPRERVILRLRF
VEERTQSEIGEAIGVSQMQVSRLLAGVLARLRERLDALVAA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtcccctgcctgcccaccgcacccccaccgcaccccgcgcgctgacctgcgtc
cccctgcccggctcgtcagccgtccagcgtcccgagcacccggggagcgacctcgagacc
ctgctcgccacctacgagcgggcctcgaaccccgccgaccgcgaccgcctgctcgccgac
gtcgtggcggccacgatgcccctcgccgactccctcgcgctgcgctacaccggccggggc
atcgacaccgaggacctcatccaggtcgcccgcaccgcgctcgtgggcgccgtccagcgc
taccgacccggagccgggcgcggcttcgaggccttcgccgtgccgaccgtgcgcggcgag
ctcaagcgccacttccgcgacgccggctggatggtccgcccgccccgcggcctccaggag
ctgcgggccgagctcgtcccggccgaggacgagctgcgccagcgcctcgggcgcgacgcg
accctcaccgagctggccgcggccgtcgggcgcgaggggtccgacgtcgccgaggcccgg
gccaccgcgtccgccttcacgcccgcctccctcgacgccccgaccccgtcgggcggcacg
gccggcgagcgcctcgccgacccggtcgacgtggccgacggcgtgctgctgcgggccgtc
gtgcgcgccgaggtcgcccggctcaccccgcgcgagcgggtcatcctccgcctgcgcttc
gtcgaggagcgcacgcagagcgagatcggcgaggccatcggggtcagccagatgcaggtg
tcccggctgctcgccggggtgctggcgcggctgcgcgagcgcctcgacgccctcgtcgcc
gcctga
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