Phycicoccus sp. HDW14: G7075_17020 Help Entry G7075_17020       CDS       T06484                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism phw  Phycicoccus sp. HDW14 Pathway phw03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:phw00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     G7075_17020  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:phw03400]     G7075_17020 Enzymes [BR:phw01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      G7075_17020 DNA repair and recombination proteins [BR:phw03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      G7075_17020 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol Motif Other DBs NCBI-ProteinID:  QIM22437 UniProt:  A0A6G8G172 LinkDB All DBs Position 3459650..3460534 Genome browser AA seq 294 aa AA seqDB search MAERYVPSVTRVEVAGRRLKLTSLEKVMYPATETTKGEVLDYYARIAEVMLPHLADRPVT RVRWPHGVEDQMFFEKNLPSGAPSWLPRVPIDDVTYPLVAGVAEIAYLVNLNSLELHVPQ WTVDADGVRQNPNRLVIDLDPGKPAGLHECAQVALVLRARLERLGLELYPVTSGSKGMQL YAGLGGDLSSDEVRELAMQLAQEMTKKHPDLVLWKMTKSLRPGKVFLDWSQNVAAKTTIS PYSMRGRELPHVAAPRTWDEVERGAQEPDSLQQLMFDEVLERVERDGDLLADLP NT seq 885 nt NT seq  +upstreamnt  +downstreamnt gtggctgagcggtacgtgccgtcggtgacgcgggtcgaggtggccgggcgccggttgaag ctgaccagcctcgagaaggtgatgtaccccgccaccgagacgaccaagggcgaggtgctc gactactacgcgcgcatcgccgaggtgatgctgccgcacctcgccgaccggccggtcacg cgggtgcgctggccgcacggcgtcgaggaccagatgttcttcgagaagaacctgccgtcc ggggcgccgtcgtggctgccgcgggtgcccatcgacgacgtcacctacccgctcgtggcc ggggtcgccgagatcgcctacctcgtcaacctcaactccctcgagctgcacgtcccgcag tggacggtcgacgcggacggcgtgcggcagaacccgaaccggctggtgatcgacctcgac ccgggcaagccggcggggctgcacgagtgcgcccaggtcgccctggtcctgcgggctcgg ctcgagcggctggggctcgagctgtacccggtcacctcgggcagcaaggggatgcagctg tacgcggggctcggcggcgacctgtcctccgacgaggtccgtgagctggcgatgcagctg gcccaggagatgacgaagaagcacccggacctcgtgctctggaagatgaccaagtcgctg cgcccggggaaggtcttcctcgactggagccagaacgtcgccgcgaagacgaccatcagc ccgtactccatgcgcgggcgcgagctgccccacgtcgcggcgccgcgcacctgggacgag gtggaacgcggtgcgcaggagccggactcgctgcagcagctgatgttcgacgaggtgctc gagcgcgtcgagcgcgacggcgacctcctcgccgacctcccctga

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