Phycicoccus sp. HDW14: G7075_18470
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Entry
G7075_18470 CDS
T06484
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
phw
Phycicoccus sp. HDW14
Pathway
phw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G7075_18470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phw03400
]
G7075_18470
Enzymes [BR:
phw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
G7075_18470
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
G7075_18470
DNA repair and recombination proteins [BR:
phw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
G7075_18470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_TFIIB
Ribosomal_S13
Zn_ribbon_6
Zn_ribbon_recom
Zn_ribbon_NUD
Motif
Other DBs
NCBI-ProteinID:
QIM22658
UniProt:
A0A6G8G222
LinkDB
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Position
3766152..3766964
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AA seq
270 aa
AA seq
DB search
MPELPEVESARSVIDRGGLHRTIIGVDDSDTWECRPHLPGEIRDALVGHRLTAAHRRGKS
IWCDVGGDGSPTLGIHLGMSGRILVSGPGGTAEGGDYQGTGRRADPARRREEWFRFTLEF
EDGGALRLLDPRRLGRVRLDPDVDALGPDAAEVGREEFRERVGRGRLPVKARLLDQSSIA
GVGNLLADEVLWRARLDPRRPAGELSVEELDGLRRQVRAAVRSAIRHGGVHTLEVVAHRG
PSGHCPRCGAEMRRATVGGRTTWFCPREQV
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagcttcccgaggtcgagtcggcccggtccgtcatcgaccggggaggcctgcac
cgcaccatcatcggcgtcgacgactccgacacgtgggagtgccggccgcacctgcccggc
gagatccgcgacgccctcgtcgggcaccggctgaccgcggcacaccggcgtggcaagtcc
atctggtgcgacgtcggcggtgacgggtcgccgaccctcggcatccacctgggcatgagc
gggcgcatcctcgtgagcggtccgggtggcacggccgagggcggggactaccagggcacc
ggccggcgggccgaccccgcccgtcgccgcgaggagtggttccgcttcaccctcgagttc
gaggacggcggggcgctgcggctgctcgaccctcggcggctcgggcgggtgcggctcgac
cccgacgtcgacgcgctcgggcccgacgccgccgaggtcgggcgcgaggagttccgcgaa
cgggtcgggcgcgggcggctgcccgtcaaggcccgactgctcgaccagtcgagcatcgcc
ggggtgggcaacctgctcgccgacgaggtgctgtggcgggcccggctcgacccgcggcgg
ccggcgggggagctgagcgtcgaggagctcgacgggctgcggcggcaggtgcgcgcggcc
gtccgctcggcgatccggcacggcggcgtgcacaccctcgaggtcgtggcgcaccgcggg
ccgtcggggcactgcccgcgctgcggcgccgagatgcgccgggcgaccgtcggcggccgc
acgacgtggttctgcccccgcgagcaggtctga
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