Peptacetobacter hiranonis: KGNDJEFE_00018
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Entry
KGNDJEFE_00018 CDS
T06633
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
phx
Peptacetobacter hiranonis
Brite
KEGG Orthology (KO) [BR:
phx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phx03016
]
KGNDJEFE_00018 (truA)
Enzymes [BR:
phx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
KGNDJEFE_00018 (truA)
Transfer RNA biogenesis [BR:
phx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KGNDJEFE_00018 (truA)
Prokaryotic type
KGNDJEFE_00018 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Pus10_C
CBM_5_12
Motif
Other DBs
NCBI-ProteinID:
QEK19634
LinkDB
All DBs
Position
complement(18182..18913)
Genome browser
AA seq
243 aa
AA seq
DB search
MRNIKITVQYNGANYCGWQEQPNSPGIQGNIEYAIKEITGEKVKINGSGRTDAGVHALGQ
VANFKIESQIPVNRIPDALNSKLPKDISIIDAEEVEDEFHARYSAKGKIYKYLVYNSRYR
NPILKDISYQVKYDLDFEKMKKEAESLIGTYDFCGFMSSGSSVKDTVRTIKSVKIEKEDD
LIVFEFEGNGFLYNMVRILSGTLIDIGRGRITESMEDIIKSQDRSKAGHTAPGHALFLKK
VFY
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatataaaaataaccgttcaatacaacggagcaaattattgtggttggcaagag
cagccaaactctcctggaatacagggaaatattgaatatgcaataaaggaaataacaggt
gagaaagtaaaaataaatggttcaggaagaactgatgctggagtacatgcacttgggcag
gtagcaaacttcaaaatagaatctcaaatacctgtaaatagaataccagatgcattaaat
tctaagctgccaaaagacatctctataatagatgccgaggaagtggaagatgaatttcat
gcgagatatagtgcaaaaggtaaaatatacaaatatttagtgtataatagtagataccgc
aatcctatcttgaaagatatatcatatcaagtaaaatatgatttagactttgaaaagatg
aaaaaagaagcagaatcacttattggaacatatgatttctgtggctttatgagcagcgga
tcttccgtaaaagacactgtaagaacgataaaaagcgttaaaatagaaaaagaagatgac
ttaattgtattcgaatttgaaggaaacggattcctttacaatatggtcagaattctttct
ggtacgcttatagatatcggaaggggaagaataacagaaagcatggaggatataataaaa
tctcaggacagatcaaaagcaggtcatacagcgcctggacacgcattattcctcaaaaaa
gttttctattaa
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