Peptacetobacter hiranonis: KGNDJEFE_00546
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Entry
KGNDJEFE_00546 CDS
T06633
Symbol
rlmCD_1
Name
(GenBank) 23S rRNA (uracil-C(5))-methyltransferase RlmCD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
phx
Peptacetobacter hiranonis
Brite
KEGG Orthology (KO) [BR:
phx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phx03009
]
KGNDJEFE_00546 (rlmCD_1)
Enzymes [BR:
phx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
KGNDJEFE_00546 (rlmCD_1)
Ribosome biogenesis [BR:
phx03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KGNDJEFE_00546 (rlmCD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
Methyltransf_15
MTS
Cons_hypoth95
PrmA
TRM5-TYW2_MTfase
Methyltransf_11
RrnaAD
Methyltransf_4
FtsJ
N6_N4_Mtase
Methyltransf_32
Methyltransf_12
UPF0020
Ubie_methyltran
PCMT
TPMT
Methyltransf_18
AviRa
Motif
Other DBs
NCBI-ProteinID:
QEK20065
LinkDB
All DBs
Position
528547..529905
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AA seq
452 aa
AA seq
DB search
MLEKNKEYVVDIVDMGESGVGIGKYDGFTVFVDCALVGEKVKVKINKSKKNYAVGDLVEI
IEHSPYRVDRVCDDSLKMCGGCQIQELDYNKQLELKTNEVKQVISRIGKIEGATIHDTIG
METPFRYRNKAQFPVQMRKGEPVIGFYKKKSHEVIPTAKCMIQHELNDEIIEVVREFIVE
NNISVYDEVKHKGLLRHIVTKIGFTTGEVMVVLVANGKNIPNVNKLAKMLEERIKGFKTL
VVNVNTNKTNVILGRENKVICGTGKINDYIGNLVFEISPLSFFQVNPVQTEVLYNKALEY
ANLTGNETVFDIYCGIGTISLFLAQKAKKVYGIEIVEDAIKDAKRNAELNGLENTEFYAG
KAEEVVPKMYKEGKKADVVVVDPPRKGCDEKVLDTIVSMDPERVVYVSCNPSTLARDLAY
MDERGFKCVEIQPVDMFPHSVHVENVALLERK
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgctagagaaaaataaagagtatgtagtagacatagtggatatgggtgagtctggtgtc
gggattggtaaatacgatggatttacagtttttgtggactgtgcattagttggagaaaag
gttaaggtaaagataaataagtctaagaaaaattatgcggttggtgatcttgttgagatt
attgagcattctccatacagagtagatagagtttgcgacgatagcttaaagatgtgtggt
ggttgtcagattcaggagcttgactacaacaagcagcttgagcttaaaactaacgaggtt
aagcaggttatttcaagaattggtaagattgaaggtgcgactatacacgatacaatcggt
atggaaactccatttagatacagaaataaggctcagttcccagttcagatgagaaaagga
gagcctgtgataggattctataaaaagaagagccacgaggtaattccaacagctaagtgt
atgattcagcatgaattaaatgacgaaataatcgaggttgttagagaatttattgtcgaa
aataatataagtgtgtacgacgaagtgaagcacaaaggacttttaagacacatagttaca
aaaatcggatttacaactggcgaggttatggttgtattagttgcaaatgggaaaaatata
cctaatgtaaataaacttgcaaaaatgcttgaagagagaataaaaggatttaagacttta
gttgtaaatgtaaatacaaataagacaaatgtaattcttggaagagagaataaagttata
tgtggaacaggaaaaatcaacgattatataggaaatcttgtgtttgaaatatctccactt
tcattcttccaggtaaatccagtgcagacagaagtgttatacaacaaggctttagagtat
gcaaatttaactggaaatgaaacagttttcgatatatactgcggaattggtacaatttct
ctgttcttagcacagaaagctaagaaggtatacggaattgagattgttgaagatgcgata
aaagatgctaagagaaatgcagaacttaacgggcttgaaaatactgaattttacgctgga
aaagcggaagaggttgttccaaagatgtacaaagaaggaaagaaagcagatgttgtcgtt
gttgaccctccaagaaagggctgcgatgagaaggtacttgatactatagtttctatggat
ccagagagagtggtttacgtttcttgtaacccatctactttggcgagagatttagcgtat
atggatgagagaggttttaaatgcgttgaaattcagccagttgatatgttccctcactca
gtacatgtggaaaatgtggcattattagagagaaaataa
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