Peptacetobacter hiranonis: KGNDJEFE_01472
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Entry
KGNDJEFE_01472 CDS
T06633
Symbol
rny
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
phx
Peptacetobacter hiranonis
Pathway
phx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KGNDJEFE_01472 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phx03019
]
KGNDJEFE_01472 (rny)
Messenger RNA biogenesis [BR:
phx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KGNDJEFE_01472 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
DUF7669
Motif
Other DBs
NCBI-ProteinID:
QEK20985
LinkDB
All DBs
Position
complement(1537689..1539230)
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AA seq
513 aa
AA seq
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MDVIDKILVALGCAIVGIIVGYFVRRNISEAKVGQAETRAKEIIDKANHDSETVRKEKLL
EAKEEIHKLRTEAEKENRERRNEVQKYERRVLQKEENLDKKTSELESKEANLRDKVKALD
KKEEEVEIIKHKQLEKLESISGISSEKAKEIILTNAERDVRREMSIMIKEVESQAKDEAE
KKAREIIGYAIQKCAADHVAETTVTVVNLPNDEMKGRIIGREGRNIRTLETLTGIDLIID
DTPEAVILSGFDPIRREVARIALEKLIADGRIHPARIEEMVEKARKEVENIIKEYGEQAA
FETGVHGLHPELIKLLGRLNYRTSYGQNVLKHSIEVAHIAGIMASELGVDVKLAKRAGLL
HDIGKSVDHEMEGTHVEIGMDLLRRYKESKEVIHAMSTHHGDYEPQTIEAVLVTAADAIS
AARPGARRETLEAYIKRLEKLEEIANSYEGVEKSFAIQAGREIRIMVKPEEVSDEELHLL
ARDMTKKIEEGLEYPGQIKVSIIRETRAIEYAK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtcatagataagatattagtggcgttaggttgcgcaatagtcggaataatagta
ggttattttgttagaagaaatatatctgaagctaaagttggccaggccgaaactagagct
aaagaaattatagataaagcaaaccatgattctgaaacagtaagaaaagaaaaactatta
gaagctaaagaagaaattcataaattgcgtacagaagcagagaaagagaacagagaaaga
agaaacgaagtacagaagtacgaaagaagagttttacagaaagaagaaaatcttgacaaa
aaaacatctgaacttgaatcaaaagaagcaaatcttagagacaaagtaaaagcattagac
aaaaaagaggaagaagtagaaatcataaagcacaaacagcttgaaaaacttgaaagtatt
tcaggaataagctcagaaaaggctaaagaaatcatacttacaaatgctgaaagagatgtt
agacgtgagatgtctataatgataaaagaagtagaatctcaggcaaaagacgaagctgaa
aagaaagctagagaaataataggatatgctatacagaaatgtgcagcagatcacgttgcc
gaaacaactgttacagttgtaaatcttccaaatgacgaaatgaaaggaagaataatcggt
agagaaggtagaaacataagaacacttgaaacattaacaggaatagatctaataatagat
gatactcctgaagcagttatactttctggatttgaccctataagaagagaagtagctaga
atagctcttgaaaaacttatagcagatggtagaatacatccagcaagaatagaagaaatg
gtagaaaaagctagaaaagaagttgaaaacataataaaagaatatggagaacaggcagca
tttgaaacaggtgtgcatggacttcatccagagcttataaaacttcttggtagattaaac
tacagaactagttatggccagaatgtccttaaacattctatagaggttgctcatatagct
ggtataatggcatctgaattaggtgtagacgttaaattagctaagagagcaggtcttctt
catgacataggtaaatctgttgaccatgaaatggaaggtactcacgttgaaataggtatg
gacttattaagaagatacaaagaatctaaagaagttatacatgctatgtcaactcaccat
ggagactacgaaccacagactatagaagctgtattagttactgctgcagatgctatatca
gcagctagacctggtgctagacgtgaaactctagaagcatacattaagagacttgaaaaa
cttgaagagatagccaattcttatgaaggtgtagaaaaatcatttgcaatacaggctggt
agagaaataagaataatggtaaaaccagaagaagttagcgatgaagaattacatctatta
gctagggatatgactaagaaaatagaagaaggacttgaatatccaggccagataaaagta
agcataataagagaaactagagcaatagaatatgcaaaataa
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