Peptacetobacter hiranonis: KGNDJEFE_01491
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Entry
KGNDJEFE_01491 CDS
T06633
Symbol
polC_2
Name
(GenBank) DNA polymerase III PolC-type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
phx
Peptacetobacter hiranonis
Pathway
phx03030
DNA replication
phx03430
Mismatch repair
phx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KGNDJEFE_01491 (polC_2)
03430 Mismatch repair
KGNDJEFE_01491 (polC_2)
03440 Homologous recombination
KGNDJEFE_01491 (polC_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phx03032
]
KGNDJEFE_01491 (polC_2)
03400 DNA repair and recombination proteins [BR:
phx03400
]
KGNDJEFE_01491 (polC_2)
Enzymes [BR:
phx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KGNDJEFE_01491 (polC_2)
DNA replication proteins [BR:
phx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KGNDJEFE_01491 (polC_2)
DNA repair and recombination proteins [BR:
phx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KGNDJEFE_01491 (polC_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
DNA_pol3_a_NII
DNA_pol3_a_NI
Rv2179c-like
tRNA_anti-codon
RNase_H_2
HHH_3
YhfH
DEDDh_C
DUF7743
Motif
Other DBs
NCBI-ProteinID:
QEK21004
LinkDB
All DBs
Position
complement(1559456..1563757)
Genome browser
AA seq
1433 aa
AA seq
DB search
MESLKECMIKMDISNTSLIKKMEDVYIKKVIYFKENKTVYFYLSSKDVVPYEYLERAQRE
IKAKNKYFKEIKFKIEYTGFERKTEKDIMKKYWPNIVYILKSICPSISGWQKEIEYLCID
NKLKIKIPKGIFYQRIMNKNITTTLKHTISEEFGIDMDIEIESAVDEKVDRKKLVEKIDR
EFNEKIMILEKENRNKTSESEEESGYVIKDEKDENMIYGENVNVLTEKIENLDSNSGTVG
IEGTIFNIEIKELRNGKILLMLMVTDYTSSITCKIFLTDTNKDWVLGKISKGMYIKIKGD
VLYDTFQREISMTISGMRKEEREERKDTAEKKRVELHAHTQMSSMDAICSVKGLVSRAAK
WGHPAIAITDHGVVQGFPDAMNAAKKEGIKVLYGVEGYLTEDNKDAIEDANDKSLSQEFV
VFDLETTGFSNINDKITEIGAVKIRDFEIVDRFSELVNPEKDISYRVQELTGITNEMVKD
KPTIEEILPKFMEFVGDDVLVAHNADFDTGFIMQKCKEQGLEYKNKKVDTLMLARIMLPN
LKRYKLDKVAKEVGVQLLNHHRAVDDAEATANIFIKFLGMLKKQGVEKLSDVNTVLGKVD
YTKLKTHHITLIAKNQTGIKNLYKIVSDAHVNHFYRAPRILQSVLDEYREGIIVGSACEA
GVVYDAVKKRLPDEEMEKIIAPYDYIEVMPIDNNRFMIDNGDVEDEDELKEINKRVVETA
KKFGKIPVATGDVHFLDKHDAVLRRVLKFSQGFKLDDEETYLHFRTTDEMLDEFSYLGEE
LAYEVVVENTNLIADMVEDVKPIPDETYPPVIEGSDVELREMCFKKAVDIYGDPLPEIVE
KRLNRELNSIIGNGYAVMYIIAQKLVAKSLSDGYLVGSRGSVGSSFAATMSDITEVNPLP
AHYVCPNKECKYSYFYAIGEWGSGIDLPDKVCPKCGEKLIKNGHDIPFEVFLGFEGDKEP
DIDLNFSGSYQPVIHKYTEELFGEGHVYRAGTIGTVAEKTAFGYAKKYVEENDIEVPSAE
VLRLAEGCTGVKRTSGQHPGGVMVIPDYKDVYDFTPIQYPANDVNCGVITTHFDYHSISG
RILKLDILGHDGPTIIRMLEDITGITITDIPLDDPATMSLFTSTEALGVTPEEIDCEIGC
LAIPEFGTKFVRQMLLDTKPTTFAELVRISGLSHGTDVWVNNAQDLVRENIVGLKEVIST
RDDIMNYLIFKGLQPKMSFTIMESVRKGRGLKPEHEAAMIENNVPDWYINSCKKIKYMFP
KAHAVAYVMTSFRLAYCKVHYPEAFYATYFTTKVEDFDADLIIKGYDAIKAKKKEIEELG
NDATQKEKGMYIILEVAQEMYARGIKIAPVDIYKSSATEFEVIGPGLLRPPMTALQGVGE
NAAIHIVEERENGEFISKEDFRKRTKISRTVVETLDKHGSLGSMSDKNQLSLF
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
ttggagagcttaaaggaatgtatgataaaaatggatataagcaatacttctcttataaaa
aagatggaagatgtttatataaagaaagttatctactttaaagaaaataaaactgtatat
ttttatctatcttctaaagacgttgttccatatgagtatttagaaagagctcaaagggag
ataaaggctaagaataaatactttaaagagataaaatttaagatagagtatacaggcttt
gagagaaaaacagaaaaagatataatgaaaaaatattggccgaatatagtatatatacta
aagagtatctgcccatctatatctgggtggcagaaagagattgagtatttatgcatagat
aataagctcaagataaagattccaaaggggatattttatcaaagaattatgaataagaat
atcactacaactctaaagcatacaataagcgaggagtttggaattgatatggatattgaa
atcgagagcgcagtcgatgaaaaggttgatagaaagaaattagttgaaaaaatagataga
gaattcaatgaaaagattatgattctcgaaaaagaaaatagaaataaaactagtgagtcc
gaagaagaaagcggatatgttataaaagatgagaaggacgaaaatatgatttatggagaa
aatgtaaacgtccttacagaaaaaatagaaaacctagatagcaattctggaactgtaggt
atagagggaactatatttaatatagaaataaaagagcttagaaatggtaaaatccttcta
atgcttatggttacagactacacaagttctataacttgtaaaatattccttactgatact
aataaagattgggtacttggaaaaataagcaagggtatgtatataaagataaagggagat
gtgctttatgatacattccagagagagataagtatgacaatcagcggtatgagaaaggaa
gaaagagaagaaagaaaagatactgctgagaagaaaagagtggaactacacgcacatact
cagatgtcctcaatggacgcaatttgctcagttaaaggacttgtatctcgtgctgcaaaa
tggggacatcctgctattgcaataactgaccacggtgttgtacagggattcccagatgct
atgaatgcagctaaaaaagaagggataaaggtgctttatggggttgaaggttatctaaca
gaggataataaagacgccatagaggatgcaaatgataagagtttatctcaggagtttgta
gtattcgatttggaaaccacaggtttttcaaatataaacgataagataacagaaataggt
gctgttaagataagagactttgagattgtggatagatttagtgagcttgtaaatccagaa
aaggatatatcttatagagtgcaagagcttacaggaattacaaatgaaatggtaaaagac
aagcctacaattgaagaaatacttcctaagtttatggagtttgtgggagatgatgtattg
gttgctcataatgcggacttcgatacaggatttattatgcagaagtgtaaggagcaggga
ttggagtataagaataaaaaggtagatacactgatgcttgctagaattatgcttcctaat
ttaaaaagatataagctagacaaggttgcaaaagaggtcggcgtgcagttacttaaccac
catagggctgtagatgatgccgaggcaactgcaaatatatttataaaattccttggaatg
ttaaaaaaacaaggtgttgaaaaattatccgatgtaaatacagtacttggaaaggttgat
tatacaaaactaaagactcatcatataacattgattgcaaagaatcagactggtatcaaa
aatctttataagattgtatctgatgcgcatgttaatcatttttacagagcaccgagaatc
cttcaaagtgtattagatgaatatagagagggaattattgtaggatctgcttgtgaagca
ggagttgtatacgatgctgttaagaaaagacttccagatgaagaaatggaaaagattata
gctccatatgactatattgaagtaatgccgatagataataatagatttatgatagataat
ggagatgttgaggacgaagatgagttaaaggaaatcaacaaaagagttgtagaaactgcc
aagaaatttggcaaaattcctgtagctactggagatgttcatttcttagataaacacgat
gcggtacttagaagggtgcttaaattctctcaaggatttaagttagatgatgaggaaact
tatctccattttagaactactgacgagatgttagacgagttttcttatttaggagaagaa
cttgcttatgaggttgttgtagaaaatacaaaccttatagctgatatggtagaggatgtt
aaaccgataccagatgaaacttatccaccagtaattgaaggttcagatgtcgaacttaga
gagatgtgctttaaaaaggctgtggatatttatggagatccacttccagagatagtagaa
aaaaggcttaatagagagctaaactctataatcggtaatggttatgcggtgatgtatata
attgcacagaagctagttgcaaaatcactttcagatggataccttgttggttcaaggggt
tctgttggttcttcatttgcagctacaatgagtgatataacagaggttaacccacttcca
gctcattatgtttgtccgaataaagagtgtaagtattcgtacttctatgctataggtgaa
tggggatctggaatagatttaccggataaagtttgtccaaaatgtggtgaaaaacttata
aagaatgggcatgatataccttttgaagttttcttaggatttgaaggggataaagaacca
gatatagaccttaacttctctggttcatatcagccagttatacataagtatactgaggag
ctatttggtgaaggtcacgtctacagagcaggtacaattggtactgttgcggaaaaaact
gcatttggttatgcaaagaaatacgttgaagaaaatgatatagaagttccatcagctgag
gtgctcagactagctgagggatgcacaggtgttaagagaacatcagggcagcatcctggt
ggggtaatggttataccagattacaaggatgtttatgattttactccaattcagtatcca
gctaatgatgtaaactgtggagttataactactcacttcgattatcattctataagtggt
agaattctgaagctagacatacttgggcacgatggtccgaccattataagaatgcttgaa
gatataacaggaataacaataactgatattcctcttgatgaccctgctacaatgtcacta
tttacttcaactgaagcacttggggtaactcctgaggaaatagattgtgaaataggatgt
cttgcaattccagaattcgggacaaaattcgttagacagatgcttttagatactaagcct
actacatttgccgagcttgtcagaatatctgggctttctcatgggacagatgtttgggta
aacaatgcacaggatttggttagagaaaatatagttggattaaaagaagttatatctaca
cgagacgatataatgaactacttgatatttaaaggtcttcagcctaagatgagtttcaca
ataatggagagtgttagaaaaggtagaggattaaaaccagagcatgaggctgcgatgata
gaaaataatgttccagattggtatataaattcttgtaagaaaataaaatacatgttccct
aaagcacatgcggttgcatatgttatgacttctttcagacttgcgtattgtaaggtgcat
tatccagaggcattctatgctacatactttactactaaagtagaggattttgatgcggat
cttattataaaaggatacgatgcgataaaggcaaagaaaaaagaaatagaagagcttgga
aatgatgcaactcagaaagaaaagggaatgtatataattttagaagttgcacaggaaatg
tatgctaggggaataaaaattgcgcctgttgatatttataagtcatctgcaactgaattt
gaagtgataggacctggacttttaagaccacctatgacagcacttcagggagttggagaa
aatgcagcgatacatattgtagaggaaagagaaaatggagagtttatttctaaggaagat
tttagaaagagaacaaagatttcgagaactgttgttgaaacattagataaacatggctct
cttggaagtatgagtgataaaaatcagctttctctattctaa
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