Peptacetobacter hiranonis: KGNDJEFE_02032
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Entry
KGNDJEFE_02032 CDS
T06633
Symbol
cshE
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshE
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
phx
Peptacetobacter hiranonis
Pathway
phx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KGNDJEFE_02032 (cshE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phx03019
]
KGNDJEFE_02032 (cshE)
03009 Ribosome biogenesis [BR:
phx03009
]
KGNDJEFE_02032 (cshE)
Enzymes [BR:
phx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KGNDJEFE_02032 (cshE)
Messenger RNA biogenesis [BR:
phx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KGNDJEFE_02032 (cshE)
Ribosome biogenesis [BR:
phx03009
]
Prokaryotic type
rRNA helicases
KGNDJEFE_02032 (cshE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SecA_DEAD
Cas3-like_C_2
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QEK21539
LinkDB
All DBs
Position
2150637..2151752
Genome browser
AA seq
371 aa
AA seq
DB search
MDFKDLNIKEDIIDILKKSGITKPTPVQEECIGIIKDGRDVIAQSQTGTGKTLAFLIPTL
EKINKNKKDVSALILTPTRELALQISNEAEKLAEPLGLNILSAYGGKDIKSQVNKLKGNI
HLVIATPGRLLDHLDRKTISLKNLDIFILDEADQMLLMGFKNEIDAILKETNKKRQSLFF
SATMDSQVKKLAYRYTNDPAFIEIKSQEVTLEKINQSIVKTTDRRKFDSLCKVLDGDNPF
MAIIFCRTKRRADKLEEDMGSRGYNCEKIHSDISQAKRERIMKNFRNMKTQYLIATDVAS
RGLDITGVTHIYNYDFPETAEDYIHRIGRTGRAGENGDTCAFVTDKNTKILEDVENKLGF
KIKVRFDDTEN
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggattttaaagatttgaacataaaagaagatataatagatatcttaaaaaaatctgga
ataacaaaacctaccccagttcaagaagagtgtataggtattataaaggacggtagagat
gtaatagctcagtcacagactggaacaggtaaaacacttgcattcttaattcctacgctt
gaaaaaataaacaaaaataaaaaggatgtttctgcacttatcctaactcctacaagagaa
cttgcacttcagatttctaacgaagctgaaaaactagcggaaccactaggattaaatata
ttatctgcttatggaggaaaggatataaaatctcaggtaaataaactaaaaggaaacata
cacttagtaatagctactcctggtagacttttagatcatttagatagaaaaacaataagc
ttaaaaaatctagatatatttatattagatgaagctgatcagatgcttcttatgggattt
aaaaatgaaatagatgcaattcttaaagaaacaaataagaaaagacagtctcttttcttc
tctgctacaatggattcacaagttaaaaaacttgcctatagatatacaaacgaccctgct
tttatcgaaataaaaagtcaggaagtaacattagaaaaaataaaccaatctattgtaaaa
actacagatagaagaaaattcgacagtttatgcaaggttttagatggggataatcctttt
atggctattatcttctgtagaactaagagaagagctgataaactagaggaagatatgggt
tctagaggatataactgcgaaaaaatacatagcgatatttctcaggcaaagagagaaaga
attatgaagaacttcagaaatatgaaaactcaatatctaatagcaacagatgttgcatct
agaggacttgatataactggggttacacatatatataactacgacttcccagaaactgca
gaggactacatccacagaataggaagaactggacgtgctggagaaaatggagatacttgt
gcatttgtaacagataaaaatacaaaaatacttgaagatgtagaaaacaaactaggattt
aaaataaaagtaagatttgacgatacagaaaattaa
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