Peptacetobacter hiranonis: KGNDJEFE_02176
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Entry
KGNDJEFE_02176 CDS
T06633
Symbol
rlmCD_2
Name
(GenBank) 23S rRNA (uracil-C(5))-methyltransferase RlmCD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
phx
Peptacetobacter hiranonis
Brite
KEGG Orthology (KO) [BR:
phx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phx03009
]
KGNDJEFE_02176 (rlmCD_2)
Enzymes [BR:
phx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
KGNDJEFE_02176 (rlmCD_2)
Ribosome biogenesis [BR:
phx03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KGNDJEFE_02176 (rlmCD_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_15
Methyltransf_25
Met_10
Cons_hypoth95
N6_N4_Mtase
Methyltransf_11
FtsJ
PrmA
Methyltransf_32
PCMT
Methyltransf_12
UPF0020
Med25_VWA
Adeno_E4
Motif
Other DBs
NCBI-ProteinID:
QEK21682
LinkDB
All DBs
Position
complement(2301374..2302750)
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AA seq
458 aa
AA seq
DB search
MKKRDIIEFEIGKMEFGGVSISQYGDRRIKMKGGIKGQKVKAAVKRTGRGKADVKMVELL
EKSPIETAEVCPHFEGCGGCTMLSVDYAKQLEIKEEQVLELFEDAGIRGFEFLGVQGSPD
NVGYRNKMEYTFGDEVKGGPLTLGLHKKGRHIDIQTVDGCMLVDSDFNTILKESLAFFQD
AELPYYRVVNHEGYLRNLVVRKGIHTDEIMVNIVTSSQCEFDMSKFADMINGLELKGNVV
SILHTINDGLADAVQCDEMRILYGVDYLHEEILGLKFKISPFSFFQTNTKGAEQLYTIAR
DFIGDHSNKVVFDLYSGTGSIGQLMAEKAKKVYGIEIIEEAVVAANENAKLNGLDNCEFI
AGDVKDTVKSLDVKPDLIIVDPPRPGIHKQAIKDICDFGAKEIVYISCNPKTLVDDLKDF
IGYGYMPEKVKCMDMFPNTPHCESVVKLYKIMNMACQC
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaagagagatataatcgagtttgaaatcggtaaaatggaatttggcggagtgagt
ataagccagtacggagatagaagaatcaagatgaaaggcggaataaaaggacagaaagtt
aaagctgctgttaaaagaactggaagaggtaaggcagatgttaaaatggtagagctttta
gaaaaatctccaatagaaactgcagaagtttgtcctcactttgaagggtgtggtggatgt
actatgctttctgttgactacgcaaaacagcttgaaataaaagaagaacaggtacttgaa
ctatttgaagatgctggaataagaggatttgagtttttaggtgttcagggaagtcctgac
aatgttggatacagaaataaaatggaatacacttttggtgatgaggtaaaaggtggacca
cttacactaggacttcacaaaaaaggtagacatatagatatacagacagttgacggatgt
atgttagttgattctgatttcaacacaatattaaaagagtctttagcattcttccaggat
gcagaattaccatactacagagttgtaaaccacgagggatatttaagaaaccttgtagtt
agaaaaggtatacacacagatgagataatggtaaatatagtaacatcatctcagtgcgag
tttgatatgagcaaatttgctgatatgataaacggattagaattaaaaggaaatgtagtg
agcatacttcacactataaatgatggacttgcagatgcagttcaatgcgatgagatgaga
atattatacggtgtagattatctacatgaagagatattagggcttaaatttaaaatatct
ccattctcattcttccagacaaatacaaaaggtgcagagcagctttatacgatagctaga
gattttattggagatcactctaataaggttgttttcgacttatacagtggaacaggctca
ataggtcagttaatggcagaaaaagctaagaaagtatacggtatagagataatagaagag
gctgttgttgcagctaatgaaaatgctaagttaaatggattagacaactgtgaatttata
gctggagatgttaaggatactgttaagagcttagatgttaagccagatttaataatagtt
gaccctccaagaccaggtatacacaagcaggcaataaaggatatatgcgatttcggagct
aaggagatagtgtatatttcttgtaatccaaagactttagttgatgatttaaaagacttt
ataggttatggatatatgccagagaaggttaagtgcatggatatgttccctaatacgcca
cactgtgaaagtgttgtaaaattatacaaaataatgaatatggcatgtcaatgctaa
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