Pseudothermotoga hypogea: AJ81_00035
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Entry
AJ81_00035 CDS
T04277
Name
(GenBank) phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
phy
Pseudothermotoga hypogea
Brite
KEGG Orthology (KO) [BR:
phy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phy03019
]
AJ81_00035
Messenger RNA biogenesis [BR:
phy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AJ81_00035
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
tRNA_anti_2
TraI_2
HDOD
Cas3_HD
VipD-like_C
Motif
Other DBs
NCBI-ProteinID:
AJC72849
UniProt:
A0A0X1KNL3
LinkDB
All DBs
Position
6050..7093
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AA seq
347 aa
AA seq
DB search
MKLENLLPKDVVEKLKERTKCTGPYIQELSDKMKETVELVGRIYSKKLQESKDGKKFLLM
TLMDRTGSIRAVDWYNAEENDAKLAEGDVVLARGRVVFFEGHLQLNVDREKDALVLLTEE
QYDYERFVEVTKRGIDTLYEKLVRFISEIQDREIRALLEALFVEDREFVSCFVQAPAGVS
VHHAYVGGLLEHTVDVATMCKRMSNVYDFLDKDVLVAGAMLHDIGKVREYRITKKGLEVT
TEGELKGHIALGVEILHQVASKVNIAKTKLLQLEHIVLSHHGEYEFGSPVLPKTAEAYVV
HALENMDSKLSRFRSINEKQKNGGKIWSEFDKHLGRRIWLGRWKDED
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
gtgaagctggaaaaccttttaccgaaagatgtcgtcgaaaagctcaaagagcgcacgaaa
tgtaccggtccttacatccaggagctctccgacaagatgaaggagacagtcgaactggtt
ggtaggatctatagcaaaaagttgcaggagtctaaggatggtaagaagttcctcctcatg
actctcatggacaggaccggtagcatacgcgctgtcgattggtacaacgctgaagagaac
gatgcgaagctcgccgagggagacgttgtccttgcaaggggacgtgtggtgttcttcgaa
ggtcatcttcagttgaatgtggacagggaaaaagacgctttggtgttgctcaccgaggaa
cagtacgattacgagaggttcgttgaggtaaccaagagaggcatcgacacgttgtacgag
aagctcgtgagattcataagcgaaattcaggatagagagatcagagcattgctcgaagct
ctgttcgtggaggatagagagttcgtatcttgcttcgtgcaggcccctgctggcgtgagc
gtccaccacgcgtacgtcggaggtctgctcgaacacacggtcgatgtcgccaccatgtgc
aagaggatgagcaacgtctacgatttcctggacaaagatgtgctcgttgcgggtgccatg
ctacacgacataggtaaggtgagggaatacagaataaccaagaaaggtctggaagtgacg
accgaaggagaattgaagggacacattgcgttgggtgtggagatacttcatcaggtggcg
agcaaggtcaacatagctaagacgaaacttttacagctggaacacatagtcctctctcac
cacggtgagtacgagtttggttcgccggtgttacccaagacggctgaagcttacgttgtt
cacgctctggagaacatggattccaagttgtccaggttcaggagcataaacgagaaacaa
aagaacggcggtaaaatctggagtgagtttgacaagcatctgggaagacgcatttggttg
ggaaggtggaaagatgaagattag
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