Pseudothermotoga hypogea: AJ81_00045
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Entry
AJ81_00045 CDS
T04277
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
phy
Pseudothermotoga hypogea
Brite
KEGG Orthology (KO) [BR:
phy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phy03032
]
AJ81_00045
03400 DNA repair and recombination proteins [BR:
phy03400
]
AJ81_00045
Enzymes [BR:
phy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AJ81_00045
DNA replication proteins [BR:
phy03032
]
Prokaryotic type
DNA Topoisomerases
AJ81_00045
DNA repair and recombination proteins [BR:
phy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AJ81_00045
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
DNA_ligase_ZBD
Zn_ribbon_6
DZR
Zn_Ribbon_TF
Zn_ribbon_TFIIB
Zn_ribbon_IS1595
DUF7573
Zn_ribbon_8
DUF7351
SurA_N_2
DUF7129
PRORP
DpnI
SurA_N_3
DZR_2
Zn_ribbon_3
zf_DPOE_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AJC72851
UniProt:
A0A0X1KNL8
LinkDB
All DBs
Position
8497..10665
Genome browser
AA seq
722 aa
AA seq
DB search
MAKKIIIVESPAKAKTIKEILKGEYEVVSSKGHVRDLPEREFGVDLRDFEPEFRIIEGKE
KIVEEIKEKAKGKEVYLASDMDREGEAIAWHLAFILNVLDKKNRIVFSEITPQTIRSAVQ
SPRFIDMKKVYAQHARRILDRIVGYKISPLLWKLLRTSSSAGRVQSAALKLVCEREVQRH
RFVPKKFWKVQGYIDSVRFYLTHIDGKRIDMQQVDEALARQIQQEVRKLKLVQKKSRLVE
RKPPLPFITSTLQQEAANKFGFSVSRTMQLAQMLYEGVETSEGHRAFITYMRTDSTRVSD
YARDQAEKFIKDHFGERYVGEFRSEQKKPNVQDAHEAIRPVDVEMTPQKAQKLLDKDLYK
LYKLIWERFIASQMAAALYEETIYSFESGRYGFEAKLERRIFDGFEAVLKKELEQIQPLN
GEIFNVTKWDIQQDATKPPARYTESSMVRALEARGIGRPSTYATIISTLLERKYVVKRSK
ELVPTVLGFVVNHYMEQRFPKIVDLDFTARMEEALDAIERGEKDHKQVLSEFYKEFSTQL
TKAEKEWLSIDVGTNVDCECGEKFTLKIGRFGLYLSCASCGKTSSVDLSSPAVMDEGVLY
FTEQEETKTYVCPSCGEPLKRYNGRYGAYYHCQKCGRNYRDFARGTCPKCGSAVEKKLSK
NRKYFFKCTSDACDYISWFEPSNESCPECGEKLHYRRFRSSEKLYCERCKKSFEKPKEET
NG
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaagataataatcgtcgaatcacccgctaaggccaagaccatcaaagagatt
ctcaagggtgagtacgaggtcgtatcctcgaagggacacgtacgcgatctgcccgagaga
gagttcggggtggatctcagagatttcgagccagagttcaggataatagagggcaaagaa
aagatcgtcgaggaaatcaaagaaaaggctaaaggcaaggaagtgtacctcgcttcagac
atggaccgtgagggcgaggcgatcgcatggcacttggcgttcatcctcaacgttttggac
aagaagaataggatcgtgttcagcgagataacaccacaaacgataagatcggccgttcag
tctccaaggttcatcgacatgaagaaggtgtacgcgcagcacgcgcgtcgcattctcgat
cgcatcgtcggctacaaaatcagtccgctcctgtggaaacttttgagaaccagttcgagt
gcgggcagggtgcaatctgcggccttgaaactcgtctgtgagcgtgaagtgcagcgtcac
agattcgttccaaagaagttttggaaggtgcaaggttacatcgactccgtcaggttctat
ctgacccacatcgacggtaagaggatcgatatgcaacaggtggacgaagcactcgcaaga
cagattcagcaagaggtcaggaagttaaagctcgttcaaaagaagagcaggctggtggag
agaaagccaccgttgcctttcataaccagcacacttcagcaagaagctgcgaacaaattc
ggtttttctgtgtctcgaacgatgcagcttgcccagatgctctacgaaggcgtcgaaaca
tctgaaggccacagagccttcataacgtacatgaggacggattcgacgcgcgtcagcgat
tacgcgagagaccaagctgaaaagttcatcaaagatcacttcggtgaacgttacgtcggt
gagttcagatcggaacaaaagaaacccaacgttcaggacgcacacgaagccataagacct
gtggatgttgaaatgacgccacagaaggctcaaaaacttcttgacaaagatctctacaaa
ctgtacaaactgatctgggagagattcattgcctcccagatggccgcggcgctgtacgag
gaaacgatctacagttttgaatcgggcaggtacggtttcgaagccaagcttgagagaagg
atcttcgacgggtttgaagcagtcttgaaaaaagagttggaacagatccaacctttgaac
ggtgagatcttcaacgtaaccaaatgggacatacagcaggacgcgaccaaaccgcctgca
aggtatacggaatcatccatggtcagagcgctcgaagccaggggtatcggtaggccgagc
acatacgcaactatcatctcgaccttgctcgaacgaaagtacgtcgtgaaaagatccaaa
gagctcgtacccacagtcctcggtttcgtcgtcaatcactacatggagcaaagatttccg
aagatagtggatctcgattttaccgcaagaatggaggaggcactcgatgcgatagagagg
ggcgagaaggatcacaagcaggtgctcagcgaattctataaggagttctcaactcagttg
acgaaagccgaaaaggaatggctgtccatagacgtcggaacgaacgtggactgtgagtgc
ggcgaaaagttcaccctgaaaattggacgtttcggactgtatctgtcgtgtgcgtcgtgc
gggaaaacatcttctgtggatttgagcagccctgccgtgatggacgaaggtgtgctgtac
tttacagaacaagaagagacgaagacctacgtttgtccaagctgtggagaaccactcaaa
cgatacaacggcagatacggcgcctactaccactgccagaagtgtggaagaaattacaga
gactttgcaagaggtacttgcccgaagtgtggttccgccgtggagaaaaagctcagcaag
aacaggaaatacttcttcaaatgtacgagcgatgcgtgcgattacataagctggtttgaa
ccatccaacgagtcgtgcccggagtgtggtgaaaagttacactatcgaaggtttcgctct
tcggaaaagctgtactgtgaaaggtgcaaaaagagctttgaaaagccgaaggaggagacg
aatggttga
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