Pseudothermotoga hypogea: AJ81_00390
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Entry
AJ81_00390 CDS
T04277
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
phy
Pseudothermotoga hypogea
Pathway
phy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
phy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AJ81_00390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phy03021
]
AJ81_00390
03400 DNA repair and recombination proteins [BR:
phy03400
]
AJ81_00390
Enzymes [BR:
phy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AJ81_00390
Transcription machinery [BR:
phy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AJ81_00390
DNA repair and recombination proteins [BR:
phy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AJ81_00390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Biotin_lipoyl_2
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
AJC72901
UniProt:
A0A0X1KNR8
LinkDB
All DBs
Position
complement(70638..75590)
Genome browser
AA seq
1650 aa
AA seq
DB search
MAISTFKRKIAAVKIGVASPDTIRSWSSGEVKKPETINYRTFKPERDGLFCEKIFGPTKD
YECACGKYKGKKYEGTVCERCGVRVESKEARRKRMGHIELAAPVVHIWYLKSTPSILSTL
LNIPARDLENIVYYGSRHIIEKAYIVTNPKKTSFAEGDVIYETEYNIYKKVLDFEAEQSV
IVKNPKTPVISEIDGEVSLKNERSNTGRTITWIIVRNVVRSHVQLFPGMILLVKNGQEVS
EGDILVAEKEVPALYAPFDGTVEIDELTSSLTLKPLATSKDQPLTVSIPYCCRLTVKNGA
KVKAGDQIWTAGMIQALTSPASGKVVFGKELNVRPLEDGSYEVLSSGSIYVEQTAIEKKY
PIFEGALAYVNDGDRVKAGDYLADRFLFEDEHLSLSEYAIFQQYYPDQFTVETEVENDRP
ILAITKIDEELARETSLTVGSIITENEYEAYRELYPGKIEAHYGAAAVKKLLEMIDLEKL
KAQIEAELAELPKSSGRALKLLRRLKIVKSLINSGARPEWMVLEALPVIPPELRPMIQID
GGRFATTDLNDLYRRVINRNNRLKRFLELNAPEVMIRNEMRMLQEAVDSLIYNGRVGRPV
ADRNGRPLKSLTDLVKGKKGRFRRNLLGKRVDYSGRAVIVVGPELKIHQCGLPKKMALEL
FKPFVLAKLLEEGGESSKTARKLKKTIIEREMPEAWDVLEEVIKGQTVLLNRAPTLHRMS
IQAFEPKLIEGNAIQLHPLVCPPFNADFDGDQMAVHVPLSAAAQAEARYLMLSRYNIISP
AHGKPISMPGKDIIVGIYYLTAVSKDYDFVSTDRIEFKFSSPEEAILAHSLGFVGLHTPV
LARVKQNGEEKTLKTTVGRIIFNEIVPEDLRDYSKTFGKKEIKDLIYETFKRHGMEATAD
LLDDMKDLGFHYATVSGLTISLKDLVVSPKKNAIIKDALEKVEKVEQEYAEGFLTYEERY
KEIIRIWTKATEEVQKVTYEALGENPFNPVFMMVNSGARGNIDQVKQLAGMRGLMADPSG
KTIEIPIISNFREGLNSIEFFISTHGARKGAADTALRTSSAGYLTRRLVDVAQSVFITTT
DCGTENGVKALELMSGTLTVQKLKDFLFGRILARDVIDPLSGEVVKNPDNNREYVRNSML
SDEDAEFLAKYVVSVPVCVEQVLDLQSLQLPASYAVTDEEIRLEDGTVYEVGTEVSWDLV
RNARNAGKKQIKIKVYPVVGTISQEIVWDKKGEKQLLVYQEEIDEVTAMLLEQNGVSAVK
VRPNIYVRSPLTCEAEHGVCAMCYGMDLSNHKVVNVGEAVGIIAAQSIGEPGTQLTMRTF
HTGGIATTADITQGLPRAEELFEARKKLKEPEGIFSMVSGFVKDIKEVDGKKKIYIEDLA
GEIHEYEVPEKVKEIVTRGQKVLPGQMLTTGAVKLRRMMDALGVEATAMYLLRETQKVYV
EQGVDIHNKHFEIIIRQMLGRVEIVDPGDTDFLPGQLLTLSEAMRINNEILKANAQVQSN
RNMVVGKILAKKIVAKLKDEVEEIAPEGTEVSEDIVEKAVAAGVKEIVVLEDGKPVTYQI
APKEPMKYRRRLLRITKASLEQEGWLSAASFQQTPQVLTEAAIEGRIDYLRGLKENVIVG
QLIPSGTGLEIFANIQIEETPRAAEEEKMA
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atggctatttccaccttcaagcggaagatagcagcggtgaaaataggtgtggcttccccc
gacacgataagaagctggtcgagtggggaagtcaaaaagccagagaccataaactacaga
acattcaagcccgagcgtgatggtctgttctgcgagaagatcttcggaccgacgaaggac
tacgagtgtgcctgtggcaaatacaaaggtaagaagtacgagggcacagtctgcgaaagg
tgcggcgtgagagtggaatcgaaagaagcgcgaagaaagagaatgggtcacatagaactc
gccgcaccggtggttcacatatggtatctgaagagcacaccgagtattctttccacactg
ctgaacataccggcgcgcgacttggagaacatagtttactatggtagcagacacataata
gaaaaagcctacatcgtcaccaacccgaagaagacttcgttcgccgagggagacgtaatt
tacgaaacagaatacaacatatacaagaaagttctcgacttcgaggccgagcaatcggtg
atagtcaagaatccaaaaaccccggtgatctctgagatagacggtgaggtgagtttgaag
aacgaacgttccaacaccggaagaacgataacctggatcatcgtgagaaacgttgtcagg
tcccacgtgcaactgttccccggtatgatcctcctcgtgaagaatggtcaggaggtatca
gagggtgacattctcgttgcagagaaagaagttccagcgctctatgctccttttgatggc
acagttgagatcgacgaactcacttccagtctcacgctcaaacctcttgcaacgagcaag
gatcaacctctgactgtttcgattccttactgttgcaggctcactgttaagaacggtgca
aaggtcaaggctggtgatcagatctggacggcgggaatgatccaggccttgacgagtccc
gcatccggaaaggtcgtgttcggtaaagaactgaatgtcagacctttagaggatggttct
tatgaagtgctctcttcaggctccatatacgttgagcagaccgcgatcgagaaaaagtat
cctattttcgaaggcgctctcgcctacgttaacgacggggacagggtaaaggcgggagac
tacctggcggacagattcctcttcgaggatgaacatttgtctctgagcgagtacgcaatc
ttccagcagtattatccagaccagttcacggtggagacagaggtcgagaacgacagaccg
atccttgcaatcacgaagatagatgaagaactcgccagagagacgtcattgaccgtgggt
tccatcatcaccgaaaacgaatacgaagcttacagagaactctatcctggcaagatcgag
gcacactatggtgctgcggccgtgaaaaagttgctcgagatgatcgaccttgagaagctg
aaagcacagatagaggcagagcttgcggagcttcccaaaagcagtggcagggccttgaag
ttactcaggcggttgaaaatcgtcaagagccttatcaattctggtgcgaggccggagtgg
atggtcctggaggccttaccggtgatacctcccgaactgaggcccatgattcagatagat
ggcgggaggttcgcgacgaccgacctgaacgacctctacaggagggtcataaacaggaac
aacaggttgaagcgattcttagagttgaacgctccggaagtcatgatcagaaacgagatg
agaatgcttcaagaggctgtcgacagtctgatatacaacggtagggtcggtagacccgtc
gcggacagaaacggtcggccgctgaagtccctcacggatctggtcaagggtaagaaagga
cgattcagaaggaaccttctcggcaagcgcgttgactattctggaagggctgtcatagtc
gttggtccggagctgaagatacaccagtgcggcttgcctaagaagatggcactggaactg
tttaagcccttcgtgctcgcgaaattgctcgaggaaggtggagagagcagcaagacggcg
agaaagctcaaaaaaacgatcatagaacgcgagatgcctgaagcctgggacgtcctggaa
gaagtcatcaagggacagactgtactcttgaacagagcaccgacgctgcacagaatgtcc
atacaggcttttgagccaaaactcatcgaaggtaatgcgattcagcttcatccgctcgtt
tgtcctccgttcaacgcagacttcgatggagaccaaatggctgtgcacgtacccctatct
gctgcggctcaggcagaggcacgttacctcatgttatcgaggtacaacatcatatctcca
gcgcatggaaaaccgatatcgatgccgggaaaggacataatagtcggcatatactacttg
actgccgtgagcaaagattatgactttgtgagcactgacaggattgagttcaagttcagc
tcgcccgaagaagccattttagcccattcacttggctttgttgggttgcacacgccggtg
ctcgccagagtcaagcaaaatggcgaagaaaagacgctcaagactactgtgggtcgcatc
atcttcaacgaaatcgtgcctgaggatctcagagactactcaaagactttcggcaagaaa
gagataaaggatctcatctacgaaacgttcaagagacacggcatggaagccacggctgat
ctgctcgacgacatgaaggatctcggattccattacgcgaccgtgtccggtctgacgata
tctttgaaagacttggtggtttcacccaaaaagaatgccatcatcaaggacgcgctggaa
aaagtcgagaaagtcgaacaagagtacgcagaaggcttcctcacttacgaggaaagatac
aaggagatcataaggatctggacgaaagcaacggaggaggttcagaaggtcacgtacgag
gctctcggtgaaaatcctttcaatcctgtcttcatgatggtcaactccggagcgaggggt
aacatagaccaagtcaaacaactcgccggcatgaggggcttgatggcggatccatccgga
aagacgatagagataccgataatttccaacttccgagaaggtctgaactccatcgaattc
ttcatctccacgcacggagcaaggaaaggtgctgccgacacagcgcttaggacttcctca
gcaggttatctcaccagaaggttagtcgacgttgcccagagtgtgttcataacaacaacc
gattgcggaacagaaaacggtgtcaaagcgctggaactcatgagcggtaccctgacagtc
cagaagttgaaagacttcttgttcggaaggatcttagccagggacgtcatagatcctctc
agcggggaagtcgtgaagaacccagacaacaatcgagagtatgtgagaaacagcatgctg
tccgacgaagacgccgaatttctggccaaatatgttgtttcagttcctgtttgtgtcgaa
caagttctcgatctgcagagtttgcagttgccagcttcttatgccgtcaccgatgaagag
ataaggttggaggacggcacggtttacgaggttggcactgaagtcagctgggatctggtt
cgaaacgctcgcaacgctggcaagaagcagatcaagataaaggtttatccagtggtcgga
accatttcacaggagattgtttgggacaagaagggtgaaaagcagttgctcgtgtaccag
gaagagatagatgaagtaactgcaatgctgctcgaacagaacggtgtgagcgccgtaaaa
gtgagaccgaacatctacgttagatcccccttgacctgtgaagctgaacacggcgtgtgc
gcgatgtgttacggtatggacctctcgaaccataaagtggtgaacgttggtgaggctgtg
ggaataatcgccgcccagtccataggagaacccggcacacagctcacgatgcgaacgttc
catacgggtggtatcgcgaccacagccgacataacccagggtctgcccagagctgaggaa
ctcttcgaggcgaggaagaaactcaaggaacctgaaggcattttcagcatggtctcagga
tttgtgaaggacattaaagaagttgacggaaagaagaagatctacatcgaagaccttgcc
ggtgagatacacgagtacgaagtacctgagaaagtgaaggagatcgtgacaagaggtcag
aaagtgctgccgggtcagatgctcacgacgggcgccgtgaaactcagaagaatgatggat
gcgctgggagtggaagcaacggcaatgtatttgctcagagaaacgcagaaagtgtacgtc
gagcagggcgtcgacatccacaacaagcacttcgagatcatcatcaggcagatgctcggc
agagttgaaatagtcgatccaggcgataccgacttcctgcccggacaattgttgaccctc
tcagaggctatgaggataaacaacgagatattgaaagcgaatgcgcaagttcagagcaac
aggaacatggtcgtgggcaagatcctggcgaaaaagatcgtcgcaaagctcaaagatgag
gttgaagagatcgcaccggaaggaaccgaggtcagcgaagatatcgttgaaaaagccgtt
gctgccggtgtgaaagagatcgttgtgcttgaagacggaaagcctgtcacctatcaaata
gcacccaaggaacctatgaagtacagaagaaggttattgagaatcacgaaggcttcactg
gaacaagagggctggctcagcgctgcttccttccagcagacgccacaagtgctcacagaa
gccgccatcgaaggcagaatagactacttgcgaggtttgaaagagaacgtgatcgtcggt
cagctcataccctcagggacaggtctggaaatcttcgcgaacatacagatcgaggaaaca
ccgcgcgccgcagaagaagaaaagatggcttga
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integrated database retrieval system
