Pseudothermotoga hypogea: AJ81_02695
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Entry
AJ81_02695 CDS
T04277
Name
(GenBank) single-stranded DNA exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
phy
Pseudothermotoga hypogea
Pathway
phy03410
Base excision repair
phy03430
Mismatch repair
phy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AJ81_02695
03430 Mismatch repair
AJ81_02695
03440 Homologous recombination
AJ81_02695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phy03400
]
AJ81_02695
DNA repair and recombination proteins [BR:
phy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AJ81_02695
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AJ81_02695
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AJ81_02695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
ADH_zinc_N
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
AJC73291
UniProt:
A0A0X1KPY1
LinkDB
All DBs
Position
complement(510103..513027)
Genome browser
AA seq
974 aa
AA seq
DB search
MRWVVKRIDQDELKRLVSELGISEFIARLLINRGIKDPEKAIKFLDPSKHDLHDPFLLKD
MDRAVQILLRAREQSEIVLVYGDYDVDGITGAAVLKEFLQRHGWKVVHYIPKRIDEGYGL
QPQVLEAFRNEGAKVLVTVDCGVTAIDAVQIAKAMGYDVVISDHHETAETLPLADAILDP
KRKDDEYPFKDLAGVGVAFKLISAVALQLSLDEEEVFRYLDLVALGTVADMVKLIDENRF
IVKEGLERMRKTDRPGLALLLSRLQIVDPDSRDIGFRVAPKINAAGRLDAAHDAFDLLTT
RDPTLASQLIDVLFEYNATRQEIESQIFEKAVEQIERGNLDKHPIIVVRGRDWHVGVIGI
VAARLCHRYNKPVIVISEGDEGARASARSVSGVNLIDVLQPFLEYFEEFGGHPLAVGFSL
EPESVDRFIEALRSYDIPLDDQSAVLEVDAILRLEDINENLIRELQRLEPFGHGNPEPLF
LCEGVKIEAAKLFGQNQSNVRLIVSSNGKRFEATGFGVGHLFEMSLYEPTGMDVVFTIRG
RVPTLYVVDAEVNERKLSLGRVTPQEPELRHRLNQLEQILEEPLTRNLFVFDLRMRNAFF
YWLFTTRKERCAVISLNNILSTQLYHTLLRYFDRSIDYLNSLNQQVKNNHALMTLSYFLA
NLDEVLRRYDLFIINELAVFGELREEPEILSFFDVVSRMSDRFLAVSVKRPDWLYDLAMV
LNLSPAYERLCRPTYGLLDSAGQIEDALNESNCFLFSDNKNLARFYRDISGMNQSVVVYS
HSMKLNQRLSALSVIRKKKPKLLLSSTNTDGIPNLLGEEAQITVSDSPLTLFELLDAVSF
DGTFQILNLTFSRDDVVRRKLEIEELFPDVDFIEKIVRDIGPRVQIAEFLDLLVERNYAR
NGSYAKIMLHVLEELGARQQNGNLDLSGIDTQRNSLRIGEGKLERQYFERFVEKFLLQRA
KGIYKALSNPRVVI
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
gtgaggtgggtagtaaagcgaatagaccaggacgagttgaagagactcgtttcggagttg
ggcatcagtgaattcatagccagattgttgatcaatcgcgggatcaaggaccccgaaaag
gcgatcaaattcctcgacccatccaagcatgatctacacgatccatttctcctgaaggac
atggaccgggcggttcaaattcttttgcgtgcgagagaacaaagcgaaatcgtccttgtg
tacggtgactacgatgtcgatggtatcaccggtgctgccgtgctcaaagagtttcttcag
aggcatggctggaaggttgtccactacattccaaaacgcatagatgaaggctatggattg
caacctcaggtgctggaagctttcagaaacgaaggagcgaaagtactcgtcacggtcgat
tgtggagtcacagccattgacgccgtacagatcgccaaggcgatgggctacgacgtcgtg
atcagcgatcatcacgaaacggcagagactctgccattggcggatgccatactcgatccg
aagcgaaaagacgacgaatatcccttcaaagacctcgccggtgttggagtggccttcaag
ctcataagcgccgtggctttgcaattgtctctcgatgaggaagaggtctttcggtatctg
gacctggtcgcgctcggaaccgtggcggacatggtgaagctgatcgatgagaacaggttc
atagtcaaagaaggtttggaacgtatgaggaaaaccgatagaccgggtcttgcgctgctg
ctgtcgaggcttcagatagtcgatcctgattccagagacataggttttcgcgtcgctccc
aagatcaacgccgcgggtaggctcgatgccgcgcacgacgccttcgaccttttgacgacg
cgagatcccacgctcgcatcacagctgatcgatgttttgttcgaatacaacgcgaccaga
caggagatcgaatctcagatcttcgagaaagcggtggaacagatcgagcgtggaaacctc
gacaaacaccccatcatcgtggtgcgtgggagggactggcacgttggagtcattggaatt
gttgcggcacgtctgtgccacaggtacaacaagcctgtgatagtcatatccgaaggtgac
gaaggcgccagggcctccgctcgaagcgtctctggagtgaacctgatagacgtccttcag
cctttcttggaatacttcgaagagtttgggggtcatcccctcgcagttggattcagtctc
gaacctgagagtgttgatcgtttcatagaagctctgagaagttacgatatccccctggac
gatcaatcggccgtgctcgaggtcgatgcgattctgaggctcgaagacataaacgagaac
ctgattagagagcttcagaggctcgaaccttttggtcatgggaatccagaaccactgttc
ttgtgcgagggagtgaaaattgaagcggcgaagctttttgggcagaatcaatcgaacgtc
agattgattgtgagttcgaacgggaagaggttcgaggcaacaggcttcggtgtgggacat
ctgttcgaaatgagtctgtacgagcccactggaatggacgtcgtgttcaccatcaggggc
agggtaccgacactgtacgttgttgacgccgaggtgaacgagagaaagctgtcactggga
cgtgtcactcctcaggaaccggagctcagacacagactcaatcagctggaacagatcttg
gaagagccgttgacaagaaacctgttcgttttcgatttgaggatgaggaatgcgttcttc
tactggctgttcacgacgaggaaggaaagatgtgccgtgatttcactgaacaacattctc
tcgacacagctctaccatacacttctcagatactttgatcgctcgatagattatctcaac
tctctgaaccagcaagtcaagaacaatcatgctctgatgacgctcagttacttcctggcg
aacttggatgaggtgctcagaaggtacgatctgttcatcatcaacgagctcgcggtattc
ggagaactcagagaagagccagagatcctctctttctttgacgtggtcagcaggatgtct
gacaggttcttagcggtcagtgtgaagaggcccgactggttgtacgatcttgccatggtt
ctgaacctttcgcccgcttacgaaaggctctgcaggccgacgtacggtttgctcgattct
gccggccagatagaggacgccctgaacgagtcaaactgttttctcttctcggacaacaag
aacctcgccaggttctacagggatatttctggcatgaaccagagtgtggtggtttattct
cacagcatgaagctgaaccagagactctcggctttgagtgttatcaggaagaaaaaacct
aaactcttgctgagctccacgaacaccgacggtattcccaatttgcttggagaagaagcc
cagataactgtttcggacagtcctctgactctcttcgagttgctcgacgccgtttccttc
gatggtacgttccagattttgaatctgaccttctcacgggacgatgttgtcagaagaaag
ctggaaatagaagaactgtttcctgacgtcgatttcatcgagaagatcgttcgtgatatc
ggtccgagggtacagattgcggaatttctggatcttctggttgagcgaaactatgcgagg
aatggctcttacgcaaagataatgctccatgtgctcgaagagcttggtgcccgtcaacag
aatggaaatctggatctgtccggtatcgacacgcagagaaattcactgagaatcggtgag
ggcaaactggagaggcaatacttcgaacgattcgtcgaaaaattccttctccagagagcc
aaaggtatctacaaggctttatccaacccgcgggtagtgatatga
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