Pseudothermotoga hypogea: AJ81_07935
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Entry
AJ81_07935 CDS
T04277
Name
(GenBank) hypothetical protein
KO
K03092
RNA polymerase sigma-54 factor
Organism
phy
Pseudothermotoga hypogea
Pathway
phy02020
Two-component system
phy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
phy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AJ81_07935
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AJ81_07935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phy03021
]
AJ81_07935
Transcription machinery [BR:
phy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AJ81_07935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
HTH_Tnp_Tc3_2
LEM
DUF1153
GED
TilS-like
Motif
Other DBs
NCBI-ProteinID:
AJC74115
UniProt:
A0A0X1KS24
LinkDB
All DBs
Position
1587258..1588229
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AA seq
323 aa
AA seq
DB search
MGARTMRLRLDLSREFSNREIFFKFVELPTGELLEFLKDSFPHVSLDAEDEETGLSGTSR
LRSGEKSLQEELMELIVLLRLDEEEEHIAEYIIYNLDDSGKLLVEKREICEKFSITQEKL
ENLIEAIKSVGPEGLFEGCVSGFGESASYVRPDLVIRDDLSVQVREIAIYFGGFNKKIEK
IFLYLNELLQRRKEILLSLGNMIVRKNVNFLLGKSSYPNKIKLIDAAEELELHVSTVSRA
VSAKYVKTPVGTFPMRVFFGRNVEVKFLLPLLCELLRNNPNSTDEELRRSLKEHGIELSR
RTVNKYRNIIGGIIHEERSVSER
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
gtgggagcgagaacgatgaggctgagactcgatctaagccgagaattctccaacagagag
atcttcttcaagttcgtcgagcttccaacgggagaacttcttgagttccttaaagacagc
tttccgcacgtgagtctcgatgcggaggacgaagagactggactttcagggacgagccgc
ttgcgaagcggtgagaaatctcttcaggaagaactcatggagctcatcgttttgcttcgg
ctcgatgaggaagaggaacacatcgcagagtacataatatacaatcttgacgattctgga
aagcttctggtggaaaaaagagagatctgcgaaaaattctcgataacgcaggaaaaactg
gaaaatttgatcgaagccatcaagagcgttgggcctgagggcctgttcgaaggctgtgtt
tcaggctttggggaaagcgcgtcgtacgtgagaccggacctggtgatccgagacgatctg
tctgtgcaggtcagggagattgccatctacttcggcggtttcaacaagaagatagaaaag
atcttcctttacctcaacgagttgctgcagcgcagaaaggagatactgctctctcttgga
aacatgatcgtcagaaagaacgtgaatttcttgcttggaaaatcgagctatcctaacaag
atcaagctcatcgatgccgcagaggaactggaactgcacgtttccaccgtttcgagggcc
gtttctgccaagtatgttaaaacgcctgtaggcactttcccgatgcgcgtattcttcggt
cggaacgtcgaagtgaaattcctgttacccttgctctgcgaactgctgagaaacaatccc
aactcgaccgacgaggaactgagacgttctctgaaggaacacggtatcgagctgagcaga
cgcaccgtgaacaaatacaggaacattatcggaggcatcatccatgaggagcgctctgtt
tctgaacggtga
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