KEGG   Pseudothermotoga hypogea: AJ81_07935
Entry
AJ81_07935        CDS       T04277                                 
Name
(GenBank) hypothetical protein
  KO
K03092  RNA polymerase sigma-54 factor
Organism
phy  Pseudothermotoga hypogea
Pathway
phy02020  Two-component system
phy02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:phy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AJ81_07935
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    AJ81_07935
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:phy03021]
    AJ81_07935
Transcription machinery [BR:phy03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AJ81_07935
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD HTH_Tnp_Tc3_2 LEM DUF1153 GED TilS-like
Other DBs
NCBI-ProteinID: AJC74115
UniProt: A0A0X1KS24
LinkDB
Position
1587258..1588229
AA seq 323 aa
MGARTMRLRLDLSREFSNREIFFKFVELPTGELLEFLKDSFPHVSLDAEDEETGLSGTSR
LRSGEKSLQEELMELIVLLRLDEEEEHIAEYIIYNLDDSGKLLVEKREICEKFSITQEKL
ENLIEAIKSVGPEGLFEGCVSGFGESASYVRPDLVIRDDLSVQVREIAIYFGGFNKKIEK
IFLYLNELLQRRKEILLSLGNMIVRKNVNFLLGKSSYPNKIKLIDAAEELELHVSTVSRA
VSAKYVKTPVGTFPMRVFFGRNVEVKFLLPLLCELLRNNPNSTDEELRRSLKEHGIELSR
RTVNKYRNIIGGIIHEERSVSER
NT seq 972 nt   +upstreamnt  +downstreamnt
gtgggagcgagaacgatgaggctgagactcgatctaagccgagaattctccaacagagag
atcttcttcaagttcgtcgagcttccaacgggagaacttcttgagttccttaaagacagc
tttccgcacgtgagtctcgatgcggaggacgaagagactggactttcagggacgagccgc
ttgcgaagcggtgagaaatctcttcaggaagaactcatggagctcatcgttttgcttcgg
ctcgatgaggaagaggaacacatcgcagagtacataatatacaatcttgacgattctgga
aagcttctggtggaaaaaagagagatctgcgaaaaattctcgataacgcaggaaaaactg
gaaaatttgatcgaagccatcaagagcgttgggcctgagggcctgttcgaaggctgtgtt
tcaggctttggggaaagcgcgtcgtacgtgagaccggacctggtgatccgagacgatctg
tctgtgcaggtcagggagattgccatctacttcggcggtttcaacaagaagatagaaaag
atcttcctttacctcaacgagttgctgcagcgcagaaaggagatactgctctctcttgga
aacatgatcgtcagaaagaacgtgaatttcttgcttggaaaatcgagctatcctaacaag
atcaagctcatcgatgccgcagaggaactggaactgcacgtttccaccgtttcgagggcc
gtttctgccaagtatgttaaaacgcctgtaggcactttcccgatgcgcgtattcttcggt
cggaacgtcgaagtgaaattcctgttacccttgctctgcgaactgctgagaaacaatccc
aactcgaccgacgaggaactgagacgttctctgaaggaacacggtatcgagctgagcaga
cgcaccgtgaacaaatacaggaacattatcggaggcatcatccatgaggagcgctctgtt
tctgaacggtga

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