Pseudothermotoga hypogea: AJ81_10415
Help
Entry
AJ81_10415 CDS
T04277
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
phy
Pseudothermotoga hypogea
Pathway
phy02024
Quorum sensing
phy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AJ81_10415
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AJ81_10415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phy03019
]
AJ81_10415
03036 Chromosome and associated proteins [BR:
phy03036
]
AJ81_10415
Messenger RNA biogenesis [BR:
phy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AJ81_10415
Chromosome and associated proteins [BR:
phy03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
AJ81_10415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
DUF4809
EndoS_Ig-like
Glyco_hydro_100
Motif
Other DBs
NCBI-ProteinID:
AJC74522
UniProt:
A0A0X1KTJ8
LinkDB
All DBs
Position
complement(2079800..2080078)
Genome browser
AA seq
92 aa
AA seq
DB search
MAEKFNLQDRFLNTLRTSKIEVKVYLVNGFQTKGIIRSFDSYTILLENENQQSLIYKHAI
STIMPTSFVRLVKTEQKEKEEASQAQPDGSDE
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaagttcaatcttcaggacaggtttctcaacactctacgcaccagcaagatc
gaagtcaaagtttacctggtgaacggttttcaaaccaaagggatcattcgttctttcgac
agttacacgatcttgctggagaacgagaaccagcagagtctcatctacaagcacgcgata
agcacgataatgccaacatcgttcgtcaggcttgtgaaaaccgaacagaaggaaaaggag
gaagcatcacaggctcaaccagatggttcggacgaatga
DBGET
integrated database retrieval system