KEGG   Paraglaciecola hydrolytica: AX660_07635
Entry
AX660_07635       CDS       T12116                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
phyd  Paraglaciecola hydrolytica
Pathway
phyd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:phyd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AX660_07635 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:phyd03021]
    AX660_07635 (rho)
   03019 Messenger RNA biogenesis [BR:phyd03019]
    AX660_07635 (rho)
Transcription machinery [BR:phyd03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     AX660_07635 (rho)
Messenger RNA biogenesis [BR:phyd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     AX660_07635 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT OB_RNB AAA_22 AAA_25 S1CSD-TOTE-2 AAA
Other DBs
NCBI-ProteinID: KXI29887
UniProt: A0A136A3U7
LinkDB
AA seq 421 aa
MNLTELKNKPISELVALADEMKLENMARARKQDIIFSILKAHAKSGEDIFGDGVLEILQD
GFGFLRSNDASYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKDSERYFALLKISEVN
FDRPESSRNKILFENLTPLHANERLTMERGNGSSEDITARVLDLASPIGRGQRGLIVAPP
KAGKTLLLQNIAQSIAANHPECVLMVLLIDERPEEVTEMQRLVRGEVIASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDANALHKPKRF
FGAARNIEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLNRKIAEKRVFPAIDY
NRSGTRREELLTTQDELQKMWILRKIVHEMSEIDAMEFLIGKLSMTKTNDEFFTAMRRQK
S
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgaacctaacggaactcaagaataaaccgatcagcgaacttgttgccttagccgacgaa
atgaagttggaaaacatggctcgtgcgcgcaagcaggatatcattttctcaattttaaaa
gcccatgccaaaagcggtgaagatatctttggcgatggtgtattagaaatattgcaagat
ggctttggattcttgcgttccaatgatgcatcgtatttggctggtccagatgacatttat
gtatcacctagtcagataagacgttttaatttacgcactggcgataccatttctggaaaa
atccgaccgccaaaagatagcgaacgttactttgccctgcttaaaataagtgaagtaaac
tttgaccgtcctgaaagctccagaaacaaaatcttattcgaaaacttaactccactacac
gccaatgaacgccttaccatggaacgtggtaacggaagtagtgaagatattacggcccgt
gtattggacttggcatcacctattggtcgtggccaacgtggtttaattgttgctccacct
aaggccggtaaaaccttacttttacaaaacatcgctcaatctattgctgctaaccatcct
gaatgtgtattgatggtattgctgatcgatgaacgtcctgaagaagtaaccgagatgcaa
cgtttggtgcgcggtgaagttatcgcttctacgttcgatgagcctgccagtcgtcacgtg
caagtagccgaaatggtaatcgaaaaagccaaacgcttagtcgaacacaaaaaagatgta
gttattctattagattctattacccgtttagcgcgcgcttacaacacggtaatcccttca
tcaggtaaagtattaaccggtggtgtggatgctaacgccctacataaacctaaacgtttt
tttggtgcagcacgtaacattgaagaaggtggtagcttaactattatcgccactgcactt
atcgatactggttctaagatggatgaagtcatctacgaagaatttaaaggtaccggtaat
atggaattacacttaaatcgtaaaattgccgaaaaacgggtattcccagctattgattac
aatcgttctggtactcgtcgtgaagagctattaacgactcaagatgaactgcaaaaaatg
tggatcttgcgtaagatcgtacatgaaatgtcagaaattgatgcgatggaatttcttatc
ggtaagttgtcgatgaccaaaaccaatgatgaattttttaccgcgatgcgccgtcaaaaa
agttaa

DBGET integrated database retrieval system