Pseudomonas hygromyciniae: JTY93_00390
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Entry
JTY93_00390 CDS
T09404
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
phyg
Pseudomonas hygromyciniae
Pathway
phyg03030
DNA replication
phyg03410
Base excision repair
phyg03420
Nucleotide excision repair
phyg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JTY93_00390 (polA)
03410 Base excision repair
JTY93_00390 (polA)
03420 Nucleotide excision repair
JTY93_00390 (polA)
03440 Homologous recombination
JTY93_00390 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phyg03032
]
JTY93_00390 (polA)
03400 DNA repair and recombination proteins [BR:
phyg03400
]
JTY93_00390 (polA)
Enzymes [BR:
phyg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JTY93_00390 (polA)
DNA replication proteins [BR:
phyg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JTY93_00390 (polA)
DNA repair and recombination proteins [BR:
phyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JTY93_00390 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JTY93_00390 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QSB39903
LinkDB
All DBs
Position
77928..80729
Genome browser
AA seq
933 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDDMYAEYKANRPSMPDDMRVQIEPLHQSVIALGFPLLCVEGVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSAMDIDGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLKELYEQLDIVPTLPIRGAKTLPAKLEEHKEM
AFLSYQLATIKVDVPLDVGLEDLHLIEPDREKLLELYTLLEFKSWIDEIQRDAKRVELKA
AADVAPVQSSAEPEAAETLAPVQAQYETILDQARFDVWLKKLNDAKLIAFDTETTGVDAQ
QAQLVGVSFAVQANEAAYIPLTHSYIGVPEQLDRDTVLLALKPLLEDPQKLKVGQHAKFD
MNILANCAIGGDPAHGITVRGIAFDTMLESYVLNSTATRHDMDSLAKKYLEHDTVSFQDI
AGKGAKQLTFDQIPLEQAGPYAAEDADVTLRLHLALHAQLAALPSLASVLTDIEMPLVPV
LARIERQGALVDAALLGVQSIELGNKMVELERQAYEIAGEEFNLGSPKQLGAILYEKLGL
PVLKKTGKGQASTAEEVLAKLAEDDFPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGRI
HTSYHQAVAATGRLSSSDPNLQNIPVRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMA
HLSKDEGLLNAFRDNLDVHTATAAEVFKVELGEVTSDQRRSAKAINFGLIYGMGAQKLGK
DIGVDTKTAKAYIDVYFARYPGVREYMERTRAQASDQGYVETLFGRRLYLPDIHSNKPQE
RAGAERTAINAPMQGTAADIIKKAMVKVDNWLTESGLDAKVILQVHDELVVEVREDLVAQ
VSEKIREHMSGAAKLDVPLLVEVGVGDNWDEAH
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcccccctcgtcctggtggacggttcttcatatctgtatcgcgccttccac
gcgctgccgccgttgaccacgtccaaaggcctgccgaccggtgcggtcaagggcgtgttg
aacatgctcaaaagcctgcgcaagcagtacccggacagcccgttcgcggtggtgttcgac
gccaagggcgggacatttcgcgatgacatgtacgccgaatacaaggccaaccgcccgagc
atgcccgatgacatgcgcgtgcagatcgagccgctgcaccagagcgtgattgccttgggc
ttcccgctgctgtgtgtcgaaggcgttgaggcggacgacgtgatcggcaccctggcccgc
agcagcgcagccgctgaccgaccggtggtgatttctaccggtgacaaggacatggcgcaa
ctggtcgacgggcacattaccttggtcaacaccatgaccggtagtgcgatggacatcgac
ggcgttaaggagaaattcggcgtcgctcccgagcagatcatcgactacctggcactgatg
ggcgattcctccgacaacatcccaggcgttccggggattggtcctaagactgcttcgggc
ttgctggtaggtgtgaacggcggccttaaagagctttacgagcagctcgatattgttccg
accttgccgattcgtggggccaagaccctgccggccaagttggaagaacataaagagatg
gcattcctgtcctaccagttggcgaccatcaaggtcgacgtgccactggatgtcgggctg
gaagatttgcacctgatcgaaccggaccgcgagaagctgctggagctgtacaccctgctg
gagttcaagagttggatcgatgagattcagcgcgatgccaagcgggtcgagcttaaggct
gctgccgacgtagcaccggtgcagtcttcggctgagcctgaggccgcagagacgctggcg
ccggtccaagcacagtacgaaaccatcctcgaccaggcccgttttgacgtctggctgaaa
aagctcaatgacgcgaagttgattgccttcgataccgaaactactggcgtcgatgcccag
caggcgcaactggtaggggtttcgtttgccgtacaggccaatgaagcggcctacatcccg
ctgacccattcctacatcggcgtgcccgagcaactggaccgcgatacagtcctgctggcc
ttgaagccgctgctggaagacccgcaaaagctcaaggtcggccagcacgccaagttcgac
atgaatatcctggccaattgcgccatcggcggcgacccggcacacggcatcaccgtgcgc
ggcatcgcattcgacaccatgcttgaatcctacgtgctgaattccaccgcgacccgccac
gacatggacagcctggccaaaaagtatctggagcatgacaccgtcagtttccaggacatt
gccggcaaaggcgccaagcaactgaccttcgaccagattccgttggagcaggccggccct
tacgccgccgaagacgccgatgtgaccctgcgcctgcacctggcactgcacgcacaactc
gcggcactgccgagcctggccagtgtgctgacggatatcgagatgccattggtgccggtg
ctggcacgcatcgagcgtcagggcgctttggtggatgccgcactgttgggcgtgcagagc
atcgagctgggcaacaagatggtggaactggagcgccaggcgtatgagatcgccggagag
gagttcaacctcggctcgcccaagcaattgggggcgatcctctacgaaaagctcggcctg
ccggtattgaagaaaaccggcaagggccaggcctcgaccgccgaagaagtcttggccaag
ttggccgaagatgacttcccgctgcctaaggtattgatgcagtaccgcagcatgagcaag
ctcaagagcacctacaccgaccgcttgccagagcagatcaacccgcgtaccgggcggatc
catacctcttaccaccaggctgtggcggccactgggcgcctgtcgtccagtgatccgaac
ctgcagaacatcccggtgcggaccgccgaaggcaggcggatccgccaggcgttcgtcgcg
cccaaaggttacaagctgctggcggcggactattcgcagatcgagctgcggatcatggcg
cacctgtccaaggacgagggcttgctgaacgcgttccgcgacaacctcgatgtgcacacg
gccacggcggccgaggtgttcaaggtcgagttgggcgaggtcacgtccgatcagcgccgc
agcgccaaggcgatcaacttcggcctgatctacggtatgggcgcgcagaagctgggcaag
gatatcggtgtcgataccaagaccgccaaggcttatatcgatgtgtacttcgcccgttac
ccaggggtgcgcgaatacatggagcgcacccgtgcccaggcttcggatcaaggttatgta
gaaaccctgttcgggcgccggctgtacctgccggacatccactccaacaaaccccaggag
cgcgcgggcgccgaacgtaccgcgatcaacgcgccgatgcagggcacggccgccgatatc
atcaagaaggcgatggtcaaggtcgacaactggctgacagagtcagggctggacgccaag
gtcatcctgcaggtgcacgacgaactggtggtcgaggtccgtgaagacctggtggcgcaa
gtcagcgagaagattcgagagcacatgagcggtgctgcgaaactggacgtaccgctgctg
gttgaagttggggtgggtgataactgggacgaagcgcactga
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