Pseudomonas hygromyciniae: JTY93_01295
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Entry
JTY93_01295 CDS
T09404
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
phyg
Pseudomonas hygromyciniae
Pathway
phyg00521
Streptomycin biosynthesis
phyg00523
Polyketide sugar unit biosynthesis
phyg00525
Acarbose and validamycin biosynthesis
phyg00541
Biosynthesis of various nucleotide sugars
phyg01100
Metabolic pathways
phyg01110
Biosynthesis of secondary metabolites
phyg01250
Biosynthesis of nucleotide sugars
Module
phyg_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JTY93_01295 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JTY93_01295 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
JTY93_01295 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JTY93_01295 (rfbB)
00525 Acarbose and validamycin biosynthesis
JTY93_01295 (rfbB)
Enzymes [BR:
phyg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
JTY93_01295 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
NAD_binding_10
NmrA
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
QSB40070
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All DBs
Position
complement(305605..306687)
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AA seq
360 aa
AA seq
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MRILITGGAGFIGSALVRHLIQHTGHEVLNLDKLTYAGNLESLTSIATNTRYEFVQADII
DQATVSAVLARFQPQAIMHLAAESHVDRSIDGPSDFIQTNIVGTYSLLEATRAYWQQLPE
PAKSAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWQRTYGLP
VLLTNCSNNYGPFHFPEKLIPLVILNALAGKALPVYGDGLQVRDWLFVEDHARALLKVVT
EGVVGETYNIGGHNEQRNIDVVRGICALLEELAPQRPAGVAQFTDLITFVKDRPGHDQRY
AIDASKIERELGWVPEETFETGLRKTVQWYLDNLEWCRRVQDGSYQGQRLGNTDLKDLIA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattctgattaccggcggtgcaggatttattggctcggctctggtccggcacttg
attcaacataccgggcatgaagtgctcaacctcgacaaactgacctacgccggcaatctt
gagtcgctgaccagtattgcgaccaatacccgctatgaattcgtccaggccgatatcatc
gaccaggccaccgtcagcgcagtgctggcacgctttcagccccaggccatcatgcacctg
gcagccgagtcccatgtcgaccgctccatcgacggtccgtcggactttatccagaccaac
atcgtcggcacctacagcctgctggaagccactcgcgcctactggcaacagttgccagag
ccggccaaaagcgccttccgcttccatcacatctccaccgacgaagtgtatggcgacctg
catggcgtggatgatctgttcaccgaaaccacgccttacgcgccaagctcgccctactcc
gcgagcaaggcggcgtccgaccacctggtccgcgcctggcagcgcacttacggcttgccg
gtgctgctgaccaactgctcgaacaactacgggccgttccacttcccagagaagctcatc
ccgctggtgatcctcaatgccctggcaggcaaggccctgccggtgtacggcgatggcctg
caagtacgcgactggctgtttgtcgaagaccacgcccgtgcgttgctcaaagtggtcacc
gaaggtgtggtgggcgagacctacaatatcggcggtcacaacgaacagagaaacatcgac
gtggtccgtggcatctgtgccctgctcgaagagctggcgccacagcgtccggccggcgtt
gcccagttcaccgacctgatcaccttcgtcaaggatcgcccaggccacgaccagcgctac
gccatcgatgccagcaagatcgagcgcgaattgggctgggttcctgaagaaaccttcgaa
accggcctgcgcaagaccgttcagtggtatttggataacctggagtggtgccgccgggtg
caggacggcagctatcaaggacaacgactgggcaacaccgacctaaaggatttgatcgca
tga
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