Pseudomonas hygromyciniae: JTY93_01825
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Entry
JTY93_01825 CDS
T09404
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
phyg
Pseudomonas hygromyciniae
Pathway
phyg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JTY93_01825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phyg03400
]
JTY93_01825
Enzymes [BR:
phyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JTY93_01825
DNA repair and recombination proteins [BR:
phyg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JTY93_01825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
WHD_PriA
Zn_ribbon_6
HypA
PIF1
iSirtuin
AAA_16
TrwB_AAD_bind
AAA_22
Zeta_toxin
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
QSB40169
UniProt:
A0ABX7JYS2
LinkDB
All DBs
Position
complement(428574..430793)
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AA seq
739 aa
AA seq
DB search
MPDAILRLALPSPLRRLFDYRAPAGVVRAQLQPGMRVRVPFGRREMIGILIEVADHSEVP
AEKLKPALAILDATPPLPASLFKLCLWTSQYYQHSLGDTLSWALPVLLRQGELAEARQER
FWSMAPGARLDDPRIARAPRQREALATLAQHPHGVAHQLLSKLMLSKDSLDLLLAKDLVQ
VEIRRHAPGERHEHWLAQPELPLNPEQRAAFEAISAGADSFHAFLLAGVTGSGKTEVYLQ
LIRETLEAGKQALVLIPEINLGPQTLARFEQRFNARIALVHSAVNDRERLESWLAARDGE
ADIIIGTRSALFTPMKNPGLIIIDEEHDGSYKQQEGLRYHARDLALVRARQENIPIVLGS
ATPSLESLHNAYTGRYGLLRLNERAGGAKQPRFLRLDVKSRPLDSGISGPMQQAIGQTLA
AGQQVLVFLNRRGFAPTLLCHDCGWMSECNRCDARMTVHQRSGELRCHHCGHVERVPRHC
PQCGKVDLRPVGAGTERAEERLGILFPDFPVLRVDRDSTSRKDAMNQLFATIQKGQPCIL
VGTQMLAKGHHFPRVTLVSILDADGGLFSGDFRASERMAQLIVQVAGRAGRAEEPGKVII
QTHLADHPLLIQLTEQGYFAFAEQALSERRSAGLPPFAHLALLRAEAHKPGQAEGFLDEA
CSAAERLLGELGLSGIELLGPVPAPMERRAGRYRAQLLLQASARAPLHRLLSSWLLALEQ
MPSGRQVRWSLDVDPVDLY
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgacgccattttgcgcctcgccctgccctcgcccctgcgccgcttgttcgattat
cgggcgcctgccggtgtggtgcgggcgcagttgcagccagggatgcgcgtgcgcgtgccg
ttcggccggcgggagatgatcgggatcctgatcgaagtggcggaccacagcgaagtgccg
gcagaaaagctcaagccggccctggccatcctcgatgccacgccaccgctgccggcgtcg
ctgttcaagctgtgcctgtggacctcccagtattaccagcacagcctgggcgacaccttg
agctgggcgttgccggtgctgttgcgccagggcgagctggccgaggcccgccaggagcgc
ttctggtcgatggcccccggcgcgcgcctggacgacccgcgcatcgcccgcgccccgcgc
cagcgtgaggccctggccaccctggcgcagcatccccacggcgttgcccatcagttgctg
agcaaactgatgttgagcaaggacagcctggacctgctgctggccaaggacctggtgcaa
gtggaaatccgtcgccatgcccccggcgagcgccatgagcactggctggcccaaccggaa
ctgccgctgaacccggaacagcgcgccgcctttgaagccatcagcgctggcgccgacagc
ttccacgcgttcctgctggccggcgtcaccggcagtggcaagaccgaagtctatttgcag
ttgatccgcgaaaccctggaagccggtaagcaggcactggtgctgatccccgagatcaac
ctcggcccccagaccctggcgcgcttcgagcaacgcttcaatgcgcggattgccctggtg
cactcggccgtcaacgaccgcgagcgcctggagtcctggcttgccgcccgggacggcgag
gccgacattattatcggtacccgctcggccctgttcacgccgatgaaaaaccccggcctg
atcatcatcgacgaagaacacgacggctcttacaagcagcaggaaggcctgcgctaccac
gcccgcgacctggccctggtgcgcgcacgccaggaaaacatcccgattgtgctgggctcg
gccacgccctccctggagagcctgcacaacgcctataccgggcgctacggcctgctgcgc
ctcaacgagcgggcgggcggtgccaagcaaccgcgtttcctgcgcctggatgtaaaaagc
cggccactggacagcggtatttccgggccgatgcaacaagccatcggccagaccctggct
gccggccagcaagtgctggtgttcctcaatcgccggggctttgcgccaactctgctgtgt
cacgactgcggctggatgtccgagtgcaaccgttgcgatgcacggatgaccgtgcaccag
cgctccggcgagttgcgctgccatcactgcggccatgtggaacgggtcccgcgccattgc
ccgcaatgcggcaaagtcgacctgcggccagtaggcgcaggcaccgagcgcgccgaggaa
cgcctggggattctgtttccggacttcccggtactgcgggtagaccgcgacagtacgtcg
cgcaaggacgcgatgaaccagttgtttgccaccatccagaaaggccagccctgcattttg
gtaggcacgcagatgcttgctaaaggccatcacttcccccgcgtgaccctggtctcgatc
ctggatgccgatggcgggttgttctccggggactttcgcgccagtgagcgcatggcgcaa
ctgatcgtgcaggtcgcaggccgcgccggacgtgccgaggaacccggcaaagtgatcatc
cagacccacttggccgaccacccactgctgattcaactgacagagcaaggctacttcgcc
ttcgccgagcaggcattgagcgagcgtcgctccgccggcctaccgccctttgcgcacctt
gccctgttgcgcgccgaggcccataaaccgggacaggccgaaggtttcctggatgaagca
tgcagcgcggctgaacgtttgctcggcgagctgggtctgagcggcattgagttgctgggc
cctgtgccagcaccgatggaacgccgcgccgggcgttatcgcgcgcagttactcttgcaa
gccagcgcccgtgcgccgctgcatcgcctattaagtagctggttgcttgctctggagcaa
atgcccagcgggcgacaggtgcgatggtcgttggatgtcgatccggtggatttgtactga
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