Pseudomonas hygromyciniae: JTY93_03200
Help
Entry
JTY93_03200 CDS
T09404
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
phyg
Pseudomonas hygromyciniae
Pathway
phyg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JTY93_03200 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phyg03400
]
JTY93_03200 (recC)
Enzymes [BR:
phyg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
JTY93_03200 (recC)
DNA repair and recombination proteins [BR:
phyg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JTY93_03200 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QSB40422
UniProt:
A0ABX7K1I3
LinkDB
All DBs
Position
758245..761694
Genome browser
AA seq
1149 aa
AA seq
DB search
MPDATSLSAGFMVVHGNRLDELRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAE
DPEDDDTGGCGIAAAIDVQLPGSFMWQLYRMVLGRDEIPVKSLLDKAPLTWRLMRLLPEL
IDQPHFEPLQRFLTHDTDLRKRYQLAERLADLFDQYQVYRADWLEDWAAGRHQLRNGRGE
AKPLSPANCWQAELWRALLLDVGEEGMAQSRAGVHQRFIERINKLDTAPQGLPSRVIVFG
ISSLPAQALEALAGLARFSQVLLCVHNPCRHHWSDIVADKDLLRNEYKRQARKTGMPVTI
DPQTLHQHAHPLLAAWGKQGRDYINLLDSYDDPNSYRSAFRDGRIDLFSDSEPTTILNQL
QDDILELRPLPETRERWPAVDLQHDTSIRFHIAHSAQREVEILHDQLLQRFSENPALRPR
DVIVMVPDVDSYAPHIRAVFGQLDKKDPRFIPFTLTDQGQRGRDPLLIAVEHLLKLPDSR
FPVSEILDLLDVPALRERFAILERDLPTLHRWIEGAGIRWGLNAEQRAGLGLPSELEQNS
WRFGLRRMLLGYAVGSGAACAGIEPYDEIGGLDAALIGPLVALLDALHDAHQALSQPATP
QVWGARLQDLMQRFFLASNEHDDYLLGQLEQLREDWLETCESVGLYDDLPLTVVREAWLA
GLDQGRLSQRFLAGAVNFCTLMPMRAIPFKLVCLLGMNDGDYPRAQPPLDFDLMGSDYRP
GDRSRREDDRYLLLEALLSARDQLYISWVGRSIRDNSERPASVLIGQLRDHLASGWQHAQ
EQSLLEAITQEHPLQPFSARYFHEGDPLFSYAREWQLLHEAQDLPLETTCLSAYVQEEPL
SLGQLQDFLRNPVRHFFSQRLKVFFEAAEVPLADEEPFVLDALQRYTLSDSLLAAALSDP
DHLEQALDAQAQRLQGSGLLPMVGFGECLRNELIEPLPDLLQRYQQLLALWPTPHNTAEP
VRFAHRGIELDGWVSGLHRRSDGGLLSVTTIPNSIGSIKTRKWHRLIRPWVNHLVACACG
LPLSTGLVASDDTLLLAPLEQNLAQDILGNLLLAWQAGMSEPLPVAVKTAFAWLGQTDPD
KAQAAALKAYEGDGINSDGERRESPALTRQFPDYAALVTSEDFEGWCETLYRPLITAPWR
SLTSEEARP
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgccggatgcaacgtccctcagtgctggattcatggtcgtccacggcaatcgcctggat
gaactgcgcagcctggtcgtcagttggatgcgtcgctatccattggctcccctggaaaac
gaaatcgctctggtgcaaagcaacggcatcgcacaatggctcaaactggcgcttgctgaa
gatccagaggatgacgacacgggcggctgcggcatcgccgctgcgatcgacgtgcaactg
cccggcagtttcatgtggcagctttatcgcatggtcctgggccgcgacgaaatcccggtc
aagtcccttctggataaagccccgctgacctggcgcctcatgcgcctgctgcccgagctg
atcgaccagccgcatttcgagcccctgcaacgcttcctcacccatgacaccgacctgcgt
aaacgataccaactggcggagcgcctggccgacttgttcgaccaatatcaggtttatcgt
gcggactggctggaagactgggccgcgggtcgacatcaactgcgcaatggccgaggcgag
gccaaacccttgagcccggccaactgctggcaggccgagttatggcgggcattgctgctg
gatgtcggcgaagaggggatggcgcagagccgtgccggagttcaccagcgctttatcgag
cgtatcaacaagctggacacggccccgcaaggcctgccgtctcgcgtcattgtgtttggc
atctcttccttgcccgcccaagcccttgaagcgctggccggtctggcccgttttagccag
gtcctgctatgcgtgcataacccttgccgtcaccattggtctgacatcgttgccgacaaa
gacctactgcgaaacgagtacaaacgccaggcgcgcaagaccgggatgcccgtcaccatc
gacccacaaaccctgcaccagcacgcccacccgttgctcgccgcttggggcaagcagggg
cgtgactacatcaacctgctggacagctacgacgatcccaacagttaccgatcagccttc
cgtgacgggcgcatcgacctgttcagcgacagcgaaccgaccacaatcctcaaccaactg
caggatgacatcctcgaactgcgcccccttcccgaaacgcgagagcgctggcccgccgtc
gatctgcagcacgacacctcgatccgcttccacatcgcccatagcgcccagcgggaagtg
gaaatcctccacgaccaattgctgcagcgcttcagcgaaaaccccgcgttgcggcctcgc
gacgttatcgtcatggtcccggatgtggacagctacgcgccgcatatccgtgcggtattc
ggccaactggacaaaaaagacccgcgcttcatccccttcaccctcactgaccagggtcaa
cggggccgcgatccactgttgatcgccgtcgaacatctgctgaaacttcccgacagccgt
tttccggtcagcgaaatcctcgacttgctggacgttcccgccctgcgtgagcgcttcgcc
atcctggagcgcgacctgcccactctgcaccgctggatagaaggtgccggcatccgctgg
ggtctaaacgccgagcagcgtgccggtctcggcctgcccagtgagttggagcaaaacagc
tggcgattcggcctgcgccgcatgctgctgggttacgccgtgggcagtggtgccgcctgc
gccggcattgagccctacgatgaaatcggcggcctcgatgctgcgctgatcggtccgttg
gtcgccttgcttgacgcattgcacgatgcacaccaagccctgtcacagcccgcaacacca
caagtctggggggcacgcctgcaagacctgatgcaacgcttctttctggccagcaacgaa
cacgatgactatctgctgggccagcttgagcaactgcgagaagactggttggagacttgc
gagtccgtcggcctgtacgacgatttaccgctgaccgtagttcgtgaggcttggcttgca
ggcctcgaccagggccgcctgtcccagcgcttcctcgctggcgcggtgaatttctgcacc
ctgatgccgatgcgcgccattccgttcaaactggtgtgcctgctgggcatgaacgacggt
gactatccgcgcgcgcaaccgccgctggattttgacctgatgggcagcgactaccgcccc
ggcgaccgttctcgccgtgaagatgaccgttacttgttgctggaagccctgctctcggca
cgcgatcaactctacataagctgggtcggccgcagcatccgcgacaacagcgagcgcccg
gcgtccgtgctgatcggccaactgcgcgatcacctcgccagcggctggcaacatgcccaa
gagcaatcgctgctggaggcaataacccaggaacaccctttgcaacctttcagtgcacgc
tatttccacgaaggtgatccgctgttcagctacgcccgcgaatggcagttgttgcacgaa
gcccaagacctgcccctcgaaacaacctgcctgtcagcctacgtccaggaagaacccctg
agcctgggccagttgcaggacttcctgcgtaaccccgtcaggcatttcttcagccagcgc
ctcaaggtatttttcgaagccgctgaggtgcccctcgccgatgaagagccctttgtcctc
gacgccctgcagcgctacaccttgagcgatagcctgctcgccgctgcactgagcgacccc
gatcatctggagcaagccctggatgcccaggcccagcgcctgcagggcagtggcctgctg
ccaatggttggttttggcgaatgcctgcgcaatgaactgatcgagcctttgcctgacctg
ttgcagcgctaccagcaactcctggcgctctggcccacgccgcacaacaccgcagaaccc
gtccgcttcgcgcaccgcgggattgaactcgacggctgggtcagcggcttgcatcggcgc
agtgatggcggcttgctcagcgtgaccaccattcccaacagcatcggctcgatcaagacc
cgcaagtggcatcgcctgatccgcccatgggtcaatcacctggtggcctgcgcctgtggc
cttccgttaagcacaggcctggtggccagtgatgacactctcttgctggctcccctggag
caaaaccttgcccaggatatcctcggcaacctgctcctggcttggcaggccggcatgagc
gaaccactgccggtcgcggtcaagactgcgtttgcctggctcggccagaccgatccggac
aaggcccaggctgcggccctcaaagcctacgaaggtgatggcatcaacagtgacggcgag
cgccgcgaaagcccggcccttacccgacagtttcccgattatgcagcgctggtgaccagc
gaggatttcgaaggctggtgcgaaaccctctatcgacccttgataaccgcaccctggcga
tcactgaccagcgaggaggcccgcccatga
DBGET
integrated database retrieval system
