Pseudomonas hygromyciniae: JTY93_03445
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Entry
JTY93_03445 CDS
T09404
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
phyg
Pseudomonas hygromyciniae
Pathway
phyg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JTY93_03445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phyg03021
]
JTY93_03445
Transcription machinery [BR:
phyg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JTY93_03445
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QSB40466
UniProt:
A0ABX7JYK6
LinkDB
All DBs
Position
819232..819741
Genome browser
AA seq
169 aa
AA seq
DB search
MATSSSTHRAVGELYAQHHGWVVQLLRRKLGGQEQALDLAQDTFVRILSSGPLPSLREPR
AYLNTVASRLCGQYFRRQALERAYEQSLAILEPEHAPSPETRLLVLEALDAVGQVLDGLG
SRVREIFLLSQLDGLTYPQIAEQLGLTVNVVQKAMLKAYRHCYLAVYQA
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atggccacatcctcttccacccaccgcgcggtgggtgaactctacgcccagcaccacggc
tgggtggtgcagttgctgcggcgcaagctaggcgggcaggagcaggcactggaccttgcg
caggatacctttgtgcgcattctcagcagtgggccattgccgtcgctacgtgaaccacgg
gcctatctgaacacggtcgccagccgcttatgcggccagtattttcgccggcaggccctg
gagcgtgcgtacgaacaatccctggcgatcctcgaaccggaacacgcgccatccccggaa
acccgcttgctggtgcttgaagcgctggatgcggtagggcaggtgttggacgggctgggg
agccgggtgcgggagattttcctgctgtcgcagttggatggcctgacttatccacagatc
gcagagcaactgggcctgaccgtaaatgtcgtgcaaaaggccatgctcaaggcctatcgg
cattgttacctggcggtgtaccaggcatga
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