KEGG   Pseudomonas hygromyciniae: JTY93_03525
Entry
JTY93_03525       CDS       T09404                                 
Symbol
hsdR
Name
(GenBank) type I restriction-modification system endonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
phyg  Pseudomonas hygromyciniae
Brite
KEGG Orthology (KO) [BR:phyg00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:phyg02048]
    JTY93_03525 (hsdR)
Enzymes [BR:phyg01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     JTY93_03525 (hsdR)
Prokaryotic defense system [BR:phyg02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   JTY93_03525 (hsdR)
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD Helicase_C DUF4145 HSDR_N AAA_19 SLFN-g3_helicase SNF2-rel_dom AAA_34 UvrD-helicase Vps16_C
Other DBs
NCBI-ProteinID: QSB40482
LinkDB
Position
complement(836517..839981)
AA seq 1154 aa
MAENSNFAFFKEHDPVFFQLANAAERVFSSDPNTTLIKLRQLGEALAQDLAVRAGIEFDA
TTSQGDLLFRLSREIQLDGNIRNLFHTLRIEGNKATHEFRTQHREALDGLRVARALAIWY
HQSFGTGGNTFKPGPFVVPADPSEPLRELQGQIEKLRAELGDSRQQLENNHQLAELLVQE
KHEQASLVGQMNEEARVYEQIALEREAELSNARIDFEARLKVLQQQLEDQPQAAQQVTRK
TQQASSQFDLNEDLTRILIDQQLNDAGWEADSLDLTYSKGARPEKGKNKAIAEWPTSKPK
ENADYALFAGLIPVAIVEAKRKRINIADRIPQAERYSRQLIVTENLQPAGQNTGWADGQG
GHFQVPFAFACNGRPFIKQLAELSGIWFRDLRSPANLRRPLQDFHTPGGLLDLLKRSRED
AEAKLQQEGFAYLKLRDYQENAIRAVEQALADNRRNCLLAMATGTGKTRTIIGLMYRLLK
AERFRRILFLVDRSALGEQAIEAFNEATLEQNHTLAQIYDVKELGDMAAEAETRVQVATV
QAMVKRIFQSDTPPPIDAFDCIIVDEAHRGYTLDQEMTEGELAVRDFNQYLSQYRRVLDY
FDACRVGLTATPAKHTSEVFGAPIYTYSYREAVADDWLIDHEPPIRYQTLLSQNGIHFAK
GENVSVIDTNTGEVDVAELEDELDFEIESFNRRVITPGFDKVICEQLAQELDPSGDEKTM
IFCVNQAHAERVKNLLDDAFKDVHGEDYNQAAVQIITGQSDKVKQLIRQYKNERYPSIAI
TVDLLTTGIDVPRICHLVFMRRVRSRILYEQMKGRATRRCDEIGKTVFRIYDPVDLYAAL
EPVDTMKPLVKDPSISLEQLVSELTNPASLDAPGNQPDTSHAHDVLDQLSQRVMRILRKA
SHKAEQKPTLKAKLAELENTWGVAPDKLHQHLHQLGPQQAAQFIRQHAQLLDQLATVNAL
LGSLNYPVISAHTDELKVREQNYGVYQKPADYLESFNDFIKNQLNQSVALGVVVNRPQDL
TREQLREVRLLLDGHGYSEVNLQSAWRNQTNQEIAASIVGFIRRAALGEALLPFEQRVSK
AMETIYALQPWTQVQRKWLDRLAKQLVHEVVIDQKQIGEAFKNDGGSTRLDKMLGGNLSV
VLDALNDNLWEQTG
NT seq 3465 nt   +upstreamnt  +downstreamnt
atggcagagaacagcaacttcgcctttttcaaagaacacgacccggtttttttccaactt
gccaatgcggccgagcgagttttttccagtgaccccaacacgacgctgatcaaactgcgc
cagttgggcgaagcgctcgcacaggatctggcagtaagagcaggcattgagttcgacgcc
accacttcccaaggtgatctgctgttccgcctgagtcgtgaaatccagctcgacggtaac
atccgcaacctatttcatacgctgcgcatcgaaggcaataaggctacccacgaattccgc
acccagcatcgtgaggcactggacgggctgagggtcgcccgtgcattggcgatctggtat
caccagtcgtttggcacgggtggcaacaccttcaagcctgggcctttcgtggttccggcc
gatccgagtgagcctctgcgtgagctgcaggggcagatcgaaaagcttcgcgcagagctg
ggcgacagtcgccagcaattggagaacaaccaccaattagccgaactactggtgcaagaa
aagcatgagcaagccagtcttgttgggcagatgaacgaggaagcccgcgtctacgagcag
attgcccttgaacgcgaggcagaactatcgaacgcccgaatcgatttcgaggcgcggctg
aaagtgctgcaacaacagcttgaagatcagccgcaagctgcccagcaggtcacgcgtaaa
actcagcaggcaagcagccagttcgacctcaatgaagacctcacccgtattctcatcgat
caacagttgaacgatgccggctgggaagccgattcgctcgatcttacctacagcaagggc
gctcggcccgaaaagggtaagaacaaggccatcgccgaatggccaaccagcaagccgaaa
gaaaacgctgattacgcgctgttcgccggtctaatcccagtcgccatcgtcgaagccaag
cgcaagcgtatcaacatagcggaccgcattccccaagccgagcgctattcacgccaactg
atcgttaccgaaaatctacaaccggccgggcagaacacgggctgggcggatggccagggc
ggccacttccaagtcccgtttgcctttgcctgcaatggccggcccttcattaagcagctc
gccgagctatctggcatctggtttcgtgacttgcgcagcccggccaacctacgccggccg
ctgcaggacttccacacaccgggcggcctactcgacctgctcaaacgcagccgtgaggac
gccgaggcgaagctacagcaggaaggcttcgcctatctcaagctgcgtgactatcaggaa
aacgccatccgcgccgtcgagcaggccctagccgacaatcgccgcaactgtctgctggcc
atggcgaccggaaccggcaaaacacgcactatcattggcttgatgtaccgcctgctgaag
gccgagcgctttcgccgtattcttttcctggtcgatcgcagcgccttgggggaacaggcc
atcgaagccttcaatgaggcaacgctggaacagaaccacacgctggcgcagatctacgac
gtcaaagagctcggcgacatggctgccgaagctgaaacccgggttcaggtcgccactgtg
caggccatggtcaagcgcatcttccagtcggacactccgccgcccatcgatgccttcgac
tgcatcatcgtcgacgaagctcaccgcggttacaccctcgatcaggaaatgactgaaggc
gagttggcagtgcgcgacttcaaccagtatctatcgcagtatcgtcgcgtgctcgactat
ttcgacgcctgccgcgtcgggctcaccgctacgccagccaagcacaccagcgaagtcttc
ggggctccgatatacacctacagctaccgtgaggccgtggctgacgactggctgatcgat
cacgaacctccaatccgctaccagactctgctgagccaaaacggcatccactttgccaag
ggcgagaacgtcagcgtcatcgatacgaacaccggcgaggtggatgtcgccgagctcgag
gatgaactcgacttcgaaatcgagtccttcaaccgccgcgtgattacgcccggtttcgac
aaagtcatctgcgagcaactggcacaagaactcgacccgtcgggcgacgaaaaaacgatg
atcttttgcgttaaccaggcccatgccgagcgggtcaaaaaccttctcgacgatgccttc
aaggacgttcacggcgaggattacaaccaagcagcggtacagatcatcaccgggcaaagt
gacaaggtcaaacaactgatccgccagtacaagaacgagcgctacccgagcattgccatc
acggtcgacctgttgaccaccggtatcgacgtaccacgcatttgccacttggtgttcatg
cgccgggtgcgttcgcgcattctctacgaacagatgaagggccgcgcgactcgccgctgc
gatgaaatcggcaagacggtgttcagaatctacgatccggttgatctgtacgctgccctc
gagccagtagatacaatgaagccgctagtgaaagacccaagcatcagcctcgaacagctg
gtcagcgagctaaccaacccagccagcctcgatgctcctggtaaccagccagacactagc
catgcccacgacgtcctggaccagctcagccagcgggtcatgcgtattctgcgcaaggcc
agccataaggccgagcaaaagccaaccctaaaggccaagctcgccgaactggagaacact
tggggcgtagccccggacaaactgcatcagcacctgcaccagctcggcccgcagcaagct
gcccagttcatccggcagcatgcccaattactcgatcaactcgctacagttaatgcccta
ctgggatcgcttaactacccggtaatatccgcccatacagacgaactgaaagtccgtgag
cagaactacggcgtttaccaaaaacccgccgactacctggaaagcttcaacgacttcatt
aagaatcaactgaaccagtcggttgccctgggcgtagtagtcaaccgcccgcaagacctg
acccgtgaacaattgcgcgaagtgcgtctgctgctcgacggacatggctacagcgaggtg
aacctgcaaagcgcctggcgcaaccaaacgaaccaggagatcgctgccagtatcgtcggt
ttcatccgccgcgccgccctcggagaggcgctgctgccattcgagcagcgcgtatccaag
gcgatggagactatttatgccctacagccgtggactcaagtccagcgcaagtggctggac
cgcctggccaagcaactggtgcacgaagtcgttattgaccagaagcagattggcgaagca
ttcaagaacgacggaggcagcacgcggctggacaaaatgctcggtggcaatctaagcgtg
gtgctggacgctctgaatgacaacctgtgggaacaaacgggatga

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