Pseudomonas hygromyciniae: JTY93_03690
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Entry
JTY93_03690 CDS
T09404
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
phyg
Pseudomonas hygromyciniae
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phyg03016
]
JTY93_03690 (truB)
Enzymes [BR:
phyg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JTY93_03690 (truB)
Transfer RNA biogenesis [BR:
phyg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JTY93_03690 (truB)
Prokaryotic type
JTY93_03690 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
QSB40511
LinkDB
All DBs
Position
874127..875044
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AA seq
305 aa
AA seq
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MAQVKRIRRNVSGIILLDKPIGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETLMQLGKTTTTADAEGDVLQVRDVTVGRADIEAALPAFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLACEGDTARLAVDCSKGTYI
RTLVEDIGEQLGCGAYVAELRRTQAGPFTLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLLDWPLLHFSEHSAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaaacgtatccgtcgtaacgtcagcggcatcatcctgctcgacaagccc
attggctttacctccaatgccgctttgcagaaggtccgctggctgctcaatgccgagaag
gccgggcacaccggtagcctcgatcccttggcgactggcgtattgccattgtgctttggc
gaggctaccaagttctcccaatacctgctcgattcggacaagggttacgaaaccctgatg
caactgggcaagaccaccaccacagctgatgccgaaggtgatgttctgcaggttcgcgac
gtgaccgttggtcgtgcagatattgaggccgccttacccgcttttcgtgggcaaatcagt
cagataccgccgatgtactcggctctcaagcgtgatggccagcctctttacaagctggca
cgtgcgggcgaagtagtggagcgtgaaccgcgttctgttactattgcgcgcttggaattg
ctcgcctgtgaaggcgacactgcccgtttggccgtggactgcagcaaaggcacctatatc
cgtaccctagtggaagatattggtgaacagctcggttgcggcgcgtacgttgcagaactg
cgacgcacccaggcaggtcctttcaccttggcccagacggtcacgctggaagagttggaa
gccgtgcatgccgaaggcggcaacgaagcagttgatcgcttcttgatgccatcggacagc
ggtttgctggattggccattgctgcacttctcggagcacagcgcgttctactggcttaac
ggccaaccggtacgcgctccggatgcgccgaagttcggcatggtgcgggtacaagatcac
aacggtcgctttatcggtatcggtgaagtgagcgaagacgggcgcatcgcgccgcgtcgg
ctgattcggtcagaatga
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