Pseudomonas hygromyciniae: JTY93_04425
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Entry
JTY93_04425 CDS
T09404
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
phyg
Pseudomonas hygromyciniae
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phyg03400
]
JTY93_04425 (phrB)
Enzymes [BR:
phyg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
JTY93_04425 (phrB)
DNA repair and recombination proteins [BR:
phyg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
JTY93_04425 (phrB)
Prokaryotic type
JTY93_04425 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Fer2_4
Motif
Other DBs
NCBI-ProteinID:
QSB40642
UniProt:
A0ABX7K1V7
LinkDB
All DBs
Position
complement(1028024..1029469)
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AA seq
481 aa
AA seq
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MHLIWLRSDLRLHDNTALAAACQRGPTAAVYLITPEQWLAHDDAPCKVDFWLRNLKCLSQ
ALGELNIPLLIRHADTWDQVPQVLAELCQALSVQTVHVNEEYGIHESRRDAAVAMALEAQ
GLGFHSYLDQLLFQPGSVLTKTGTYFQVFSQFRKVCYNRLHTALPRRVPTPKAQAALPLA
SDAVPEQVKGFAPPSDTLRALWPAGEDEAQRRLEQFADAQISYYKDERDYPAKPGTSQLS
AYLAAGVVSPRQCLHAALQSNQGEFESGDIGAITWINELLWREFYKHILVGYPRVSRHRA
FRPETEAVAWRHAPADLAAWQEARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTKNLL
IDWREGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFSPLSQSEKFDGEGRFIK
QWLPQLAGLNKKEVHNPDAVGGLFGVADYPRPIVDLKHSRERALAAFRALPSRQAVGGVY
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgatctggctgcgcagcgacctgcgcctgcatgacaacaccgcccttgcggcc
gcctgccagcgtggcccgacggcggcggtgtacctgatcacgcctgagcaatggctagcc
catgacgacgcaccgtgcaaagtcgacttctggctgcgcaacctcaagtgcctgagccaa
gctctgggtgaattgaatatcccgctgctgatccgccacgcggatacgtgggaccaagtg
ccacaggtattggccgagttgtgccaggccttgtcggtccagaccgtgcacgtcaacgaa
gagtacgggatccacgagagccggcgtgacgctgccgtagccatggccctggaagcacaa
gggctggggtttcacagctacctggaccaactgctgttccagcccggcagcgtgctgacc
aagacgggcacctacttccaagtgttcagccagtttcgcaaggtctgctacaaccgcctg
cacactgcccttccacgtcgagtgccaacccccaaggcccaggccgcgctgccattggcc
agcgatgcggttcccgagcaggtcaaggggtttgccccgcccagcgacaccctgcgcgca
ctttggccggccggtgaagacgaggcacagcggcgccttgagcagtttgccgacgctcag
atcagctactacaaggacgagcgcgactacccggccaaacccggcaccagccaactgtcg
gcgtacctcgcagccggcgtggtttcgccgcgccagtgcctgcatgcggcgctgcaaagc
aaccagggtgaattcgaaagcggcgatatcggcgccatcacctggatcaacgagttgctg
tggcgcgagttctacaaacatatcctggtgggctacccacgggtgtcgcgccaccgcgcg
tttcgcccggaaaccgaagccgtggcctggcgccatgcccccgctgacctggcggcctgg
caagaggcgcgcaccggtctgccgatcatcgacgccgcgatgcgccaactgctggaaacc
ggctggatgcataaccgcctgcgcatggtggtggcgatgttcctgaccaagaaccttttg
atcgactggcgcgaaggcgagcgctttttcatgcggcacttgatcgacggcgatctggcg
gccaacaacggcggctggcagtggagttcgtccaccgggactgattcggcgccgtacttc
cgcattttcagcccgctgagccagtctgaaaaattcgacggcgaagggcgctttatcaag
cagtggctaccgcagctggcgggcttgaacaagaaggaagtgcacaaccccgacgctgtc
ggcggtctgtttggcgtggccgactacccacggcccatcgtcgacctgaagcattcccgt
gagcgagcgttggcggcctttcgcgccctgccctcgcgacaggcggtgggaggcgtatat
gagtga
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