Pseudomonas hygromyciniae: JTY93_05445
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Entry
JTY93_05445 CDS
T09404
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
phyg
Pseudomonas hygromyciniae
Pathway
phyg03410
Base excision repair
phyg03430
Mismatch repair
phyg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JTY93_05445 (recJ)
03430 Mismatch repair
JTY93_05445 (recJ)
03440 Homologous recombination
JTY93_05445 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phyg03400
]
JTY93_05445 (recJ)
DNA repair and recombination proteins [BR:
phyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
JTY93_05445 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JTY93_05445 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
JTY93_05445 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QSB40833
UniProt:
A0ABX7K2P0
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All DBs
Position
1255689..1257398
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AA seq
569 aa
AA seq
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MRIDPRPLPAVLPFLGELPPLLTRLYAARGVTSQDELDKSLARLIPYQQLKGIDAAVDLL
VTALEQRQRILIVGDFDADGATASTVGTLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVAV
ALQREPQLLITVDNGISSVEGVAAAKAAGLKVLVTDHHLPGDELPAADAIVNPNQPGCEF
PSKALAGVGVIFYVLMALRARLRSLGWYDNQPQPNIGELLDLVALGSVADVVPLDANNRI
LVYQGLERIRAGRARPGIKAILEVAKRDHARITSTDLGFILGPRLNAAGRLDDMSLGIEC
LLTSDFAQAREMAAQLDGMNQDRKTIEQGMQREALAQLKDLPVESMPFGLCLFDPEWHQG
VIGILASRMKERYFRPTIAFADAGDGLLKGSGRSVPGFHIRDALAVVASQHPNLIAKYGG
HAMAAGLTLPEANFPLFAEAFDAEVRRQLREEDLTGRLLSDGTLAVEEFHLELARALRNA
GPWGQHFPEPLFHGVFQLVEQRVVGERHLKVVLKSECGAVKLDGIAFGIDREVWPNPTIR
WVELAYKLDVNEFRGQETVQLMIAHIEPR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgatcctcgcccattgcccgccgtcctgccgttcctcggtgaattgccaccg
ttgctgacccgtctttatgccgcccgtggcgtgacctcgcaggatgagctggataagagc
ctggcgcgtctgattccctatcagcagctcaaagggatcgatgccgccgtggacttgctg
gtgacggccctggaacagcgccagcggatcctgatcgttggcgacttcgatgccgatggc
gccaccgccagtaccgtgggtaccctcggcctgcgcctgctcggggccgcccatgtcgat
tacctggtgcccaaccgcttcgaatacggctacggcctgaccccggaaatcgtcgccgtg
gccttgcaacgcgagccgcagttgctgatcaccgtggacaacggcatctccagtgtcgaa
ggcgtggcggcggcgaaggcggcggggctcaaggtactggtcaccgaccaccacttgccc
ggcgacgaattgccggcggccgatgccatcgtcaacccgaaccagcccggttgcgagttc
cccagcaaggccttggcgggcgtgggagtgatcttctacgtactgatggcgttgcgcgcg
cgcttgcgcagcctgggctggtacgacaaccagccgcaacccaatatcggcgagttgctc
gacctggtggccctgggcagtgtggccgacgtggtaccgctggatgccaataaccgcatc
ctggtctaccagggcctggagcggattcgcgccggtcgtgcgcggccgggcatcaaggcg
atcctcgaagtggccaagcgtgaccacgcgcgtatcacctccactgacctgggttttatt
ctcggcccacgcctcaacgcggccgggcgcctggatgatatgagcctgggcatcgaatgc
ctgctcaccagcgacttcgcccaggcccgggaaatggccgcgcaactggacggcatgaac
caggaccgcaagaccatcgagcagggcatgcagcgcgaagccctggcccagctcaaggac
ttgccggtggagtcgatgccattcggcctgtgcctgttcgaccccgagtggcaccagggt
gtcatcggcatccttgcttcgcgtatgaaagagcgctatttccgcccgaccattgccttt
gccgatgccggtgacggcctgctcaagggctctgggcgttcggtgccggggttccatatc
cgcgatgccctggccgtggtggcgagccagcatccgaacctgatcgccaaatacggcggc
cacgccatggcggcgggcctgaccttgcctgaagcgaacttcccgctgttcgccgaagcg
ttcgacgccgaagtgcgccgccaactgcgtgaagaagacctcaccgggcgcctgctgtcc
gatggcaccttggcggtggaagagttccatctggaactggcccgcgccctgcgcaatgcc
gggccctggggccagcactttcccgaaccgctgtttcacggggtgtttcaactggtggag
caacgggtggtgggcgagcgtcacctcaaggtggtgctcaagagtgagtgcggcgcggtg
aaactcgatggcattgcttttggcatcgaccgcgaagtgtggcccaacccgaccattcgc
tgggtggagctggcctacaagctggacgtcaacgaattccgtggccaggaaaccgtgcaa
ttgatgattgcccacatcgaaccgcgctga
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