Pseudomonas hygromyciniae: JTY93_07400
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Entry
JTY93_07400 CDS
T09404
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
phyg
Pseudomonas hygromyciniae
Pathway
phyg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JTY93_07400 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyg03019
]
JTY93_07400 (recQ)
03400 DNA repair and recombination proteins [BR:
phyg03400
]
JTY93_07400 (recQ)
Enzymes [BR:
phyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JTY93_07400 (recQ)
Messenger RNA biogenesis [BR:
phyg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JTY93_07400 (recQ)
DNA repair and recombination proteins [BR:
phyg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JTY93_07400 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HTH_40
GerE
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QSB41187
UniProt:
A0ABX7K3S4
LinkDB
All DBs
Position
1682090..1684219
Genome browser
AA seq
709 aa
AA seq
DB search
MLEQAQRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLREGLA
VVVSPLIALMDDQVATLEELGVAAAALNSTLSAEQQRDLAARIRRGEVKMLYLAPERLVQ
PRMLAFLQSLEISLFAIDEAHCVSQWGHDFRREYLQLGQLAELFPNVPRIALTATADKRT
REEIVERLHLQNAERFLSSFDRPNIFYRIVPKEQPRKQLLAFLSERRSDAGIVYCLSRKK
VDEVAAFLCEQGYPALPYHAGLPNELRAYHQKRFLNEEGLIMVATIAFGMGIDKSNVRFV
AHMDLPKSLEAYYQETGRAGRDGLPADAWMVYGLQDVVMLKQMLQNSEGDERHKRLEQHK
LDAMLSLCEETRCRRQTLLAYFDEDMPQPCGHCDNCVDGVQTWDATEPARQGLSAIFRTG
QRYGVGHLVDVLLGKDNEKIRSFGHQHLSVYGVGKARAEGEWRSLFRQMVARGLVDIDLE
GYGGLRLNDSCRPLLKGEVSLELRRDLKPQTTAKSSSTSQASQLVRGEEREQWEALRALR
RKLAQEHSVPPYVIFPDSTLLEMLREQPTTMAEMARVSGVGARKLERYGQAFLEVLGGQT
EAPKEIADIRHELISLARAGMTPIQIAGQLQCSEKNVYTLLAESIGKQQLSLEQALDLPE
DLLGEIQDAFLDGEGELPPVSDIAPLFTGRVPEGVLYCVRAALQSEFEI
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaacaggctcaacgcgtcctcaaggacatcttcggctacgacagctttcgtggc
cgccagggtgcgatcattgagcgcgtggccagcggcggtgatgcgctggtcctgatgcct
accggtggtggcaagtcgttgtgcttccaggtgccggcattgttgcgtgaagggctggcg
gtggtggtttcgccgttgatcgcactgatggacgatcaagtggccactctggaagagctg
ggcgtcgccgccgctgcgttgaactcgaccctgagtgccgagcagcagcgcgacctggcg
gcgcggatccgccggggtgaagtgaagatgctctatcttgcgcccgagcgtctggtgcag
ccgcgcatgctggcgttcctgcaaagcctggaaatttccctgttcgcgattgacgaggcc
cactgcgtttcccagtggggccacgatttccggcgtgaatacctacaattggggcaactg
gccgagctgttccccaatgtgccgcgcatcgccctgaccgccacggccgacaagcgtacc
cgcgaagaaatcgtcgaacgcctgcatctgcagaacgccgagcgctttctctccagcttc
gaccggccgaatatcttttatcgcatcgtgcccaaggagcagccgcgcaagcaattgctg
gcgttcctctcggagcggcgtagcgatgccgggattgtctactgcctgtcgcgcaagaag
gtcgatgaagtggctgcgttcctctgcgaacagggctaccccgcgttgccttaccacgcc
ggcctgcccaacgagttgcgggcctatcaccagaagcgcttcctcaacgaggaaggcctg
atcatggtggcaaccattgcgtttggcatgggcatcgacaaatccaacgtacgcttcgtc
gcgcacatggacctgcccaagtctcttgaggcgtactaccaggaaaccgggcgtgccggc
cgcgatggcctgccggcggatgcctggatggtctacggcctgcaggatgtggtgatgctc
aagcagatgctgcagaactccgaaggcgatgagcgtcacaagcgcctggagcagcacaag
ctcgatgccatgctgtcgctgtgcgaagaaacccgctgccgccgccagaccttgctcgcc
tatttcgatgaagacatgccccagccgtgcgggcattgcgataactgtgtggacggcgta
cagacctgggacgcaaccgaaccggcacgccaggggctgtcggcgatcttccgtaccggc
cagcgttatggcgtcggtcatctggtggatgtgctgctgggcaaggacaacgaaaaaatc
cgcagttttggtcaccagcacctgtcggtgtatggcgtgggcaaggcgcgggctgaaggc
gaatggcggtcgttgttccgccagatggtggcccgtggcctggtggatatcgacctggaa
ggctatggcggcctgcgtctgaatgacagctgccggccgctgctcaagggcgaggtcagc
ctggaactgcgccgcgacctcaagccgcagaccactgccaagtccagcagcaccagccag
gccagccaactggtgcgcggcgaggagcgggaacagtgggaagccctgcgtgcgttgcgg
cgcaagctggcgcaagagcacagcgtgccgccctacgtcattttccccgactccaccttg
ctggaaatgctgcgcgagcagccgaccaccatggctgagatggctcgggtcagcggcgtt
ggcgcacgtaagctggagcgttatggccaggccttcctggaagtccttggcggccagacc
gaggcaccgaaggaaatcgccgatatccgtcacgaactgatcagcctggcccgcgccggc
atgacaccgatccagatcgccgggcagttgcagtgttcggaaaagaacgtctacaccttg
ctggccgaatccattggcaagcagcagttgtctctggagcaggccctcgacctgccagaa
gacttgctcggtgaaatccaggacgcgtttcttgatggcgagggggaattacccccggtt
tccgatatagcaccgctgtttaccggacgggtacccgagggcgttttgtactgtgtacgg
gccgctttgcagtcggaattcgaaatttaa
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