Pseudomonas hygromyciniae: JTY93_07545
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Entry
JTY93_07545 CDS
T09404
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
phyg
Pseudomonas hygromyciniae
Pathway
phyg02020
Two-component system
phyg02025
Biofilm formation - Pseudomonas aeruginosa
phyg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JTY93_07545
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
JTY93_07545
09142 Cell motility
02040 Flagellar assembly
JTY93_07545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyg03000
]
JTY93_07545
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
phyg02035
]
JTY93_07545
Transcription factors [BR:
phyg03000
]
Prokaryotic type
Helix-turn-helix
Other families
JTY93_07545
Bacterial motility proteins [BR:
phyg02035
]
Flagellar system
Flagellar assembly proteins
Others
JTY93_07545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA_7
nSTAND3
bpMoxR
AAA_22
GAAD
AAA_19
AAA
Motif
Other DBs
NCBI-ProteinID:
QSB41213
LinkDB
All DBs
Position
1715623..1717098
Genome browser
AA seq
491 aa
AA seq
DB search
MWRETKILLIDDDSVRRRDLAVILNFLGEENLPCGSHDWQQAVSSLSSSREVICVLIGTV
NAPGAVPGLLKTLSTWDEFLPVLLMGDVSSVDLPEDQRRRVLSTLEMPPSYSKLLDSLHR
AQVYREMYDQARERGRHREPNLFRSLVGTSRAIQHVRQMMQQVADTDASVLILGESGTGK
EVVARNLHYHSKRRDGPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGG
TLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQSVDVRIIAATHKNLESMIEVGSFR
EDLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIRFNSAAIMSLCRHGWPG
NVRELANLVERMAIMHPYGVIGVVELPKKFRYVDDEDEQLVDSLRSDLEERVAINGHTPN
FGATAMLPPEGLDLKDYLGSLEQGLIQQALDDANGIVARAAERLRIRRTTLVEKMRKYGM
SRREGDEQADD
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgaaaccaaaattctgctgatcgatgacgatagcgttcgccgccgcgacctg
gcggtgattttgaattttcttggcgaagaaaatttaccctgcggcagccacgattggcag
caggctgtcagctctttgtcgtcgagccgtgaagtcatctgtgtgctgatcgggacggta
aacgctcctggcgcagttcctggcctgttaaagacactctcaacctgggatgagttcctt
cccgtgttgctgatgggtgatgtttcttccgtggatttgccggaagaccagcgccgccgt
gtgctttccaccctggaaatgccccccagctacagcaaattgctcgactccctgcaccgt
gcccaggtctatcgcgagatgtacgaccaggcccgtgagcgcggtcgtcaccgcgaaccc
aacctgttccgcagcctggtcggcaccagccgtgcgattcagcacgtgcgccagatgatg
cagcaagtggccgataccgacgccagcgtgctgatcctcggcgagtccggcaccggcaag
gaagtggtcgcgcggaacctgcattaccattccaagcgtcgcgacggacctttcgtgccg
gtcaactgcggggcgatcccggcagagctgctcgaaagcgaactgttcggccacgagaag
ggcgcctttaccggggcgatcaccagccgtgccgggcgttttgagctggccaacggcggc
accctgttcctcgacgaaatcggcgatatgccgttgccgatgcaggtcaagctgctgcgc
gtgttgcaggaacgcaccttcgaacgcgtgggcagcaacaagacccagagcgtcgacgtg
cgcatcatcgccgccacccacaagaacctcgaaagcatgatcgaggtcggcagcttccgc
gaagacttgtactaccgcctcaacgtattccccatcgagatggccccgctgcgcgagcgt
gtggaagacatcccgttgctgatgaacgagctgatctcgcgcatggagcacgaaaagcgc
ggctcgatccgtttcaactccgccgcaatcatgtccctgtgccgccacggctggccgggc
aacgtgcgcgagctggccaacctggtggaacgcatggcgatcatgcatccgtacggggtg
atcggcgtggtcgagttgccgaagaaattccgctatgtcgacgacgaagacgagcaactg
gtggacagcctgcgcagcgacctcgaggagcgggtggcgatcaacggccatacccctaac
ttcggcgccaccgccatgttgccgcccgaagggctggacctgaaagactacctcggcagc
ctcgaacaagggctgattcaacaagccctggacgatgccaatggcattgtcgcccgcgcc
gccgagcgcctgcgtatccgccgcaccacgttggtggagaagatgcgcaagtacggcatg
agccgtcgtgagggtgatgaacaggcggatgattga
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