Pseudomonas hygromyciniae: JTY93_07670
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Entry
JTY93_07670 CDS
T09404
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
phyg
Pseudomonas hygromyciniae
Pathway
phyg02020
Two-component system
phyg02025
Biofilm formation - Pseudomonas aeruginosa
phyg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JTY93_07670
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
JTY93_07670
09142 Cell motility
02040 Flagellar assembly
JTY93_07670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phyg03021
]
JTY93_07670
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
phyg02035
]
JTY93_07670
Transcription machinery [BR:
phyg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JTY93_07670
Bacterial motility proteins [BR:
phyg02035
]
Flagellar system
Flagellar assembly proteins
Stator
JTY93_07670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_30
UPF0122
MarR_2
GerE
Rv2175c_wHTH
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
QSB41236
UniProt:
A0ABX7K0S7
LinkDB
All DBs
Position
1740426..1741166
Genome browser
AA seq
246 aa
AA seq
DB search
MTASGYNLYKKSARDSQGELIERYAPLVKRIAYHLLARLPASVQVEDLIQAGMIGLLEVS
TKYDASKGASFETYAGIRIRGAMLDEVRKGDWAPRSVHRNTRMVSDAIRSIEAKTGRDAK
DHEVAAELQLSLDDYYGILNDTLGSRLFSFDDLLQDGEHEGLHEDGASAHQEPSRDLEDE
RFQGALADAIANLPERERLVLALYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRGRL
GEWRAR
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgacagccagcggctacaacctttacaaaaaatcagcgcgtgacagccagggcgaattg
atcgagcgctatgcgcctctggtcaagcgcattgcctaccacctgctggcacgcctgccc
gccagtgtccaggtcgaagacctgatccaggccgggatgatcggcttgctcgaagtgtcg
accaagtacgacgcgagcaagggggcgagtttcgagacgtatgcgggtatccgtatccgt
ggcgcgatgctcgatgaagtgcgtaaaggtgattgggcgccgcgttcggtccaccgcaat
acccggatggtgagtgacgcaattcgctcaattgaagcaaaaaccggtcgcgacgctaaa
gatcacgaagttgcggccgaactccaattgagtctcgacgattactacgggattttgaac
gataccttgggcagccgcctgttcagtttcgacgacctgctacaggacggcgaacatgaa
gggctgcacgaggacggcgcgagcgctcaccaggagccttcacgcgacctggaagatgaa
cgcttccagggcgccctggcggacgcgattgccaatctgccggagcgtgagcggctggtg
ttggcgctgtactacgacgaagagctgaacctcaaggaaatcggtgaggtcctgggggtc
agcgaatcgcgggtcagccagctacatagccaatgcgcggcccgcttgcgggggcgtttg
ggagagtggcgagcgcgctga
DBGET
integrated database retrieval system
