Pseudomonas hygromyciniae: JTY93_08000
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Entry
JTY93_08000 CDS
T09404
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
phyg
Pseudomonas hygromyciniae
Pathway
phyg00010
Glycolysis / Gluconeogenesis
phyg00020
Citrate cycle (TCA cycle)
phyg00260
Glycine, serine and threonine metabolism
phyg00280
Valine, leucine and isoleucine degradation
phyg00310
Lysine degradation
phyg00380
Tryptophan metabolism
phyg00620
Pyruvate metabolism
phyg00630
Glyoxylate and dicarboxylate metabolism
phyg00640
Propanoate metabolism
phyg00670
One carbon pool by folate
phyg00785
Lipoic acid metabolism
phyg01100
Metabolic pathways
phyg01110
Biosynthesis of secondary metabolites
phyg01120
Microbial metabolism in diverse environments
phyg01200
Carbon metabolism
phyg01210
2-Oxocarboxylic acid metabolism
phyg01240
Biosynthesis of cofactors
Module
phyg_M00009
Citrate cycle (TCA cycle, Krebs cycle)
phyg_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
phyg_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
phyg_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
phyg_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
JTY93_08000 (lpdA)
00020 Citrate cycle (TCA cycle)
JTY93_08000 (lpdA)
00620 Pyruvate metabolism
JTY93_08000 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
JTY93_08000 (lpdA)
00640 Propanoate metabolism
JTY93_08000 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JTY93_08000 (lpdA)
00280 Valine, leucine and isoleucine degradation
JTY93_08000 (lpdA)
00310 Lysine degradation
JTY93_08000 (lpdA)
00380 Tryptophan metabolism
JTY93_08000 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
JTY93_08000 (lpdA)
00670 One carbon pool by folate
JTY93_08000 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phyg04147
]
JTY93_08000 (lpdA)
Enzymes [BR:
phyg01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
JTY93_08000 (lpdA)
Exosome [BR:
phyg04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
JTY93_08000 (lpdA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
FAD_oxidored
HI0933_like
GIDA
NAD_binding_8
FAD_binding_3
AlaDh_PNT_C
DAO
Thi4
3HCDH_N
2-Hacid_dh_C
Amino_oxidase
Spike_JR1
Motif
Other DBs
NCBI-ProteinID:
QSB41297
LinkDB
All DBs
Position
1804558..1805994
Genome browser
AA seq
478 aa
AA seq
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MSQKFDVVVIGAGPGGYVAAIKAAQLGLSTACIEKYTDKEGKLALGGTCLNVGCIPSKAL
LDSSWKFHEAQDGFAIHGINHAGVTMDVPAMVGRKANIVKGLTSGVATLFKANGVTSLQG
HGKLLAGKKVEITKPDGSTEIIEAENVILAPGSRPIDIPPAPVDQNVIVDSTGALEFQSV
PKRLGVIGAGVIGLELGSVWSRLGSEVTVLEALDTFLLAADTAVSKEALKTLTKQGLDIK
LGARVTGSKVNGEEVVVTYTDKDGEQTITFDKLIVAVGRRPVTTDLLASDSGVTIDERGF
VHVDDHCATTVPGVYAIGDVVRGMMLAHKASEEGIMVVERIKGHKTQMNYDLIPSVIYTH
PEIAWVGKNEQQLKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVI
GPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGGAIHIANRKKR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagaaatttgacgttgtagtgattggtgcgggccctggcggctacgttgccgcc
atcaaggccgctcaactgggcctctcgactgcttgcatcgaaaaatacaccgacaaggaa
ggcaaactggcgctgggcggtacttgcctgaacgtgggttgcattccttccaaggcgctg
ctggacagctcctggaaattccacgaagcccaggacggttttgccatccacggcatcaac
cacgctggcgtgaccatggacgtgccagcaatggttggccgcaaggccaacatcgtcaaa
ggcctgacctctggcgttgctaccctgttcaaggccaatggcgttacttccctgcaaggt
cacggcaaactgctggccggcaagaaagttgaaatcaccaagccagatggttcgaccgaa
atcatcgaagccgaaaacgtgatcctggctccaggttcgcgtccaatcgacattccaccg
gctccagttgatcagaacgtgatcgtggactcgaccggtgccctggaattccaatcggta
ccaaaacgcctgggcgtgatcggcgctggcgtaatcggcctggaattgggttcggtctgg
tcccgcctgggttccgaagtgaccgtactggaagccctggacacgttcctgctggctgcc
gacaccgcggtgtccaaagaagcgcttaaaaccctgaccaaacaaggtctggacatcaag
ctgggcgctcgcgtgaccggttcgaaagtcaacggcgaagaagttgtcgtgacctacacc
gacaaggatggcgaacagaccatcactttcgacaagctgatcgttgccgttggtcgccgt
ccagtgaccactgatctgctggcttccgacagcggcgtgaccatcgacgagcgtggcttt
gtgcatgtcgacgatcactgcgctaccaccgttcctggcgtctatgccatcggtgacgtg
gttcgcggcatgatgctggcacacaaggcatccgaagaaggcatcatggtggttgagcgc
atcaagggtcacaagacccagatgaactacgacctgatcccttcggttatctacacccac
ccggaaattgcatgggttggtaagaacgaacagcagttgaaagctgaaggcgttgaagtt
aacgtcggcaccttcccgtttgccgcttctggccgtgccatggcagcgaacgacactggc
ggttttgtcaaagtcatcgctgatgccaagactgaccgcgtattgggcgtccacgtgatt
ggcccaagcgctgcagaactggttcagcagggcgctatcggtatggaattcggcaccagt
gccgaagacctgggcatgatggtcttctcccatccgaccctgtccgaagcgttgcacgaa
gcagcgttggctgtgaatggcggcgccatccacatcgccaaccgcaagaagcgctaa
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