Pseudomonas hygromyciniae: JTY93_08010
Help
Entry
JTY93_08010 CDS
T09404
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
phyg
Pseudomonas hygromyciniae
Pathway
phyg00020
Citrate cycle (TCA cycle)
phyg00640
Propanoate metabolism
phyg00660
C5-Branched dibasic acid metabolism
phyg00720
Other carbon fixation pathways
phyg01100
Metabolic pathways
phyg01110
Biosynthesis of secondary metabolites
phyg01120
Microbial metabolism in diverse environments
phyg01200
Carbon metabolism
Module
phyg_M00009
Citrate cycle (TCA cycle, Krebs cycle)
phyg_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JTY93_08010 (sucD)
00640 Propanoate metabolism
JTY93_08010 (sucD)
00660 C5-Branched dibasic acid metabolism
JTY93_08010 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
JTY93_08010 (sucD)
Enzymes [BR:
phyg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
JTY93_08010 (sucD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QSB41299
LinkDB
All DBs
Position
1807365..1808246
Genome browser
AA seq
293 aa
AA seq
DB search
MSVLINKDTKVICQGITGSQGSFHTQQALEYGTKMVGGVTPGKGGTEHLGLPVFNTVKEA
VAQTGATASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTLDMLDAKVKCDELGVTLI
GPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTCVGIGG
DPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKAHVTKPVVSYIAGVTAP
AGKRMGHAGAIISGGKGTADEKFAALEDAGVKTVRSLADIGKALSELTGWAIK
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcctgatcaataaagacaccaaagttatctgccagggtattaccggttcgcaa
ggtagcttccacacccagcaagccctcgaatacggcaccaagatggtcggtggcgtaact
ccgggcaaaggcggcaccgagcacctgggtctgccagtgttcaacaccgtgaaagaagct
gttgctcaaactggcgccaccgccagcgtgatctacgttccagctcctttctgcaaggac
tccatcctggaagcagcattcggcggcatcaagctgatcgtttgcatcaccgaaggcatt
cctaccctggacatgctggacgctaaagttaagtgcgacgagctgggtgttaccctgatc
ggccctaactgcccaggtgtgatcaccccaggcgaatgcaagatcggcatcatgccaggt
cacattcacttgccaggcaaagtcggtatcgtttcccgttccggcaccctgacctacgaa
gctgtgaagcagaccactgacgccggtttcggtcagtcgacttgcgtcggcatcggcggt
gacccgatcccaggctcgaacttcatcgatatcctgaaactgttccaggaagacccgaag
accgaagcgatcgtaatgatcggtgagatcggcggttcggctgaagaagaagcggctgcc
tacatcaaggcacacgtgaccaagccggttgtttcctacatcgctggtgtgactgcccct
gcgggcaagcgcatgggccatgctggcgcaatcatctctggcggcaagggcactgcagac
gagaagtttgctgccctggaagacgcaggcgtgaaaaccgtgcgttcgctggcagacatc
ggcaaggctttgtccgagctgactggctgggcgatcaagtaa
DBGET
integrated database retrieval system
