Pseudomonas hygromyciniae: JTY93_08120
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Entry
JTY93_08120 CDS
T09404
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
phyg
Pseudomonas hygromyciniae
Pathway
phyg00061
Fatty acid biosynthesis
phyg00071
Fatty acid degradation
phyg01100
Metabolic pathways
phyg01212
Fatty acid metabolism
phyg02024
Quorum sensing
phyg04146
Peroxisome
Module
phyg_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
JTY93_08120
00071 Fatty acid degradation
JTY93_08120
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
JTY93_08120
09145 Cellular community - prokaryotes
02024 Quorum sensing
JTY93_08120
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
phyg01004
]
JTY93_08120
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phyg04147
]
JTY93_08120
Enzymes [BR:
phyg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
JTY93_08120
Lipid biosynthesis proteins [BR:
phyg01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
JTY93_08120
Exosome [BR:
phyg04147
]
Exosomal proteins
Exosomal proteins of breast milk
JTY93_08120
Exosomal proteins of breast cancer cells
JTY93_08120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QSB41320
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All DBs
Position
1829975..1831642
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AA seq
555 aa
AA seq
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MSVAFRLPLQVFFEREARHPRQRFLVQPIGGGEVQTLTWGEAGHQARCAAHWLRARELPQ
GSHIALISKNCAHWIIADLAIWMAGHVSVPLYPNLTADSVAHVLEHSEAALAFIGKLDDW
PAMAPGIKPGLATISLPLCPEGEFDFTWADLQACSPIQDDPAPAATDLATIIYTSGTTGL
PKGVMHTFGGLAFAATRGTELFGLGEGDRLLSYLPLCHVAERMFVEMAAIYTGQTVFFAE
SLDTFLTDLQRARPTALFGVPRIWTKFQMGVYGKIPEKRLDLLLRLPFIGKRVGRKVLAG
LGLDAVRVALSGAAPVPEALLRWYQSLGLDVLEVYGMTESCGYSHVCRPGQQKIGWIGLP
CPDVEVRIDPAGEVQVRSGATMLGYFKDPQKTAETLTEDGFLRTGDKGEQDAEGRLRLTG
RLKEIFKTSKGKYVAPAPIENRLAEHGRIEQVCVVGDGLSAPMGLCVLSAVGQQEAAGEA
RQSLHGSLERLLEEVNQVLDKHERLRQLVVVKDSWAVENGFLTPTLKIKRNVIESTYGPQ
FQAWSARSEAVLWQD
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcgcttttcgtttgccgctgcaggttttctttgaacgtgaggcgcgccatccg
cgccagcgcttcctggtccagcccattggcggtggcgaggtgcagaccctcacctggggc
gaagccggtcaccaggcccgttgtgccgcccattggctgcgcgcgcgggaactgccccag
ggttcgcacattgccctgatctcgaaaaactgcgcgcactggatcatcgccgacctggcg
atctggatggccgggcatgtctcggtgccgctgtatcccaaccttaccgccgactccgta
gcccatgtgctggagcactccgaggcagcgttggcgtttatcggcaaacttgacgactgg
cccgccatggccccgggtatcaagcctgggctggccaccatcagcctgccgctgtgcccc
gagggcgaattcgacttcacctgggccgacctgcaagcctgttcgccgatccaggatgat
cctgcacctgctgcgacagacctggccaccattatctacacctcaggcaccacgggcctg
cccaagggcgtgatgcacaccttcggcggcctggcgtttgcggcgacccgaggcaccgag
ttgttcggcctgggggagggcgatcgcctgctgtcctacttgcctctgtgccatgtggcc
gagcgcatgtttgtcgagatggctgcgatttacactgggcagacggtgtttttcgccgaa
agcctcgacaccttcctcaccgacctgcaacgcgcccggcccacggccttgttcggtgtg
ccgcggatctggaccaaattccagatgggcgtgtacggcaaaatcccggaaaaacgcctg
gaccttctgctgcgcctgccgtttatcggcaagcgcgtcgggcgtaaagtcctcgccggc
cttgggctggacgcggtacgggtagccctgtctggggccgcaccggtacccgaggcgctc
ctgcgctggtaccagagcctgggcctggatgtgctggaggtgtatggcatgaccgaaagc
tgcggctattcccatgtctgtcgtcccggccagcagaaaatcggctggatcggcctgccg
tgcccggacgtggaggtgcgcattgatccggccggtgaggtgcaggtgcgcagcggcgcg
accatgctcggttacttcaaggacccgcagaagaccgccgagaccctcaccgaagacggc
tttctgcgtaccggcgacaagggcgagcaggatgccgaaggccgcttgcgcctgaccggg
cgtctcaaggaaatcttcaagaccagcaagggcaagtacgtcgccccggcccccatcgaa
aatcgcctggcagagcacgggcgtatcgaacaggtgtgcgtggttggcgatggcctgagc
gcgccgatgggcttatgcgtgctgtctgcggtgggccaacaggaggcggccggcgaggct
cggcagtccttgcacggcagcctggagcgcttgctggaggaggtcaaccaggtgctggat
aaacatgagcgcttgcgtcaactggtggtggtgaaggacagttgggccgtggaaaacggc
tttctgacgccgaccctgaagatcaagcgcaacgtcatcgagtcaacctacggtccacag
ttccaggcctggagtgcgcgctccgaggcggtgctgtggcaggattga
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