Pseudomonas hygromyciniae: JTY93_08825
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Entry
JTY93_08825 CDS
T09404
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
phyg
Pseudomonas hygromyciniae
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phyg03032
]
JTY93_08825 (gyrA)
03400 DNA repair and recombination proteins [BR:
phyg03400
]
JTY93_08825 (gyrA)
Enzymes [BR:
phyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
JTY93_08825 (gyrA)
DNA replication proteins [BR:
phyg03032
]
Prokaryotic type
DNA Topoisomerases
JTY93_08825 (gyrA)
DNA repair and recombination proteins [BR:
phyg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JTY93_08825 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QSB41444
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Position
1981373..1984027
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AA seq
884 aa
AA seq
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MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI
YMRARSMIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD
GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALIDGRPRILNLKDLLEAFVRHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALIKMPWESSA
VVAMVERAGADSCRPETLDPQYGLRDGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQ
EILNQIGELIRILNSAVRLMEVIREELEVIRAEYGDVRRTEILDARLDLTLGDMIPEEER
VVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV
YWLKTYEIPEASRAARGRPLVNLLPLDTDEYITTMLPVEEYTEGHFIFMATAKGTVKKTP
LESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESDVRAMGRTAR
GVRGMRLPEGQKLISMLIPEEGSQILTASARGYGKRTAISEFPEYKRGGQGVIAMVSNDR
NGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLASDETLVGLERV
QEPSEVEGEELEGEEFDGEVIAAGDDNVDEPTLDAAADEEEPQE
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgagctgaaacagtcc
tacctcgactacgcgatgagcgtaattgtcggtcgggcactgcctgatgcgcgcgatggc
ttgaagcccgtgcaccggcgtgtgctgttcgcgatgagcgagctgggtaacgactggaac
aagccgtacaagaaatctgcccgtgttgtcggtgacgtgatcggtaagtatcaccctcac
ggcgacactgcggtgtacgacaccatcgttcggatggcccagccgttttccctgcgctac
ctgctggtagacggccagggcaacttcggttcggtcgacggcgacaacgccgcggccatg
cgatacaccgaagtgcgcatgaccaagctggcacacgagctgctggctgacctgcacaaa
gaaaccgtggactgggtgccgaactacgacggcaccgaaatgatcccggcggtcatgccg
acccgtattcccaacctgttggtcaacggctccagcggtattgccgtgggcatggccacc
aacattccgccacacaacctcggtgaagtcatcgacggttgcctggcgcttatcgacaac
cccgagctgaccgtcgatgagttgatgcagtacatccctggcccggacttcccgaccgcc
gcgatcatcaacggtcgcgccggcatcatcgaagcctatcgcaccggtcgtggccgcatc
tacatgcgcgcccgctcgatgatcgaagacatcgacaaggtcggtggccgccagcagatc
gtcatcaccgaactcccgtaccagttgaacaaggcgcgtctgatcgagaagatcgccgag
ctggttaaagagaagaagctcgaaggcatcaccgagctgcgcgacgagtctgacaaagac
ggtatgcgcgtggtgatcgagctgcgtcgtggcgaagtgcctgaggtgatactcaacaac
ctctacgcccagacccagttgcaaagcgtgtttggtatcaacgtcgtggccctgatcgac
ggtcgcccgcgcatcctgaacctcaaggatctgctggaagccttcgtccgtcaccgccgc
gaagtggtgacccgccgtaccgtattcgaactgcgcaaggcccgtgaacgtgggcacatc
ctggaaggccaggcggttgcgctgtcgaacatcgatccggtcatcgccctgatcaaggct
tcgccgactccgtcggaagccaaggaagcactgatcaagatgccatgggaatccagcgcc
gttgtggcgatggttgaacgtgccggtgccgattcgtgccgtccggagaccctggatccg
caatacggcctgcgtgatggcaagtatttcctgtcgccggaacaggcccaggccatcctg
gaactgcgcctgcaccgcctgaccggtctggagcacgagaagctgctggccgagtaccag
gagatcctcaaccagatcggcgagctgatccgcatcctcaacagcgccgtgcgcctgatg
gaagtgatccgcgaagaactggaagtgatccgcgccgaatacggcgacgtgcgtcgcact
gaaattctcgatgcgcgcctcgacctgaccctgggtgacatgatcccggaagaagagcgt
gtggtgaccatttcccacggtggctatgccaagacccagcctttggctgcgtatcaggct
cagcgtcgcggtggtaaaggcaagtcggcgactggcgtcaaggatgaggactacatcgct
cacctgctggtagccaacagccacaccacgctgctgctgttctccagcaagggcaaggtg
tactggctcaagacttacgagatcccggaagcgtcccgcgctgcccgtggtcgtccgctg
gtcaacctgttgccgctggacaccgatgaatacatcaccacgatgttgccggtcgaggaa
tacaccgaaggtcacttcatcttcatggcaaccgccaaaggcaccgtgaagaagaccccg
ctggaatccttcagtcgccagcgcagcgtgggcctgatcgccctggagctggacgaaggc
gacgtgctgatctccgcggccattaccgatggcgagcgtgaagtcatgctgttctccgac
ggtggcaaggtgacgcgcttcaaagagtccgacgtgcgtgcgatgggtcgtaccgcccgt
ggtgttcgcggtatgcgcctgccggaagggcagaagctgatttccatgctgatcccggaa
gaaggcagccagatcctcacggcttcggcccgtggttatggcaaacgtaccgctatcagc
gagttccccgagtacaagcgtggcggccagggtgttatcgccatggtcagcaacgatcgc
aacggccgtttggtcggcgcggtccaggtgctggatggcgaggaaatcatgctgatttcc
gaccagggcaccctggtacgtacccgtgttgatgaagtctcgagcctgggccgtaacacc
cagggcgtgaccttgatcaagctggccagcgacgagaccctggtgggtctggagcgtgtc
caggaaccatcggaagtcgaaggcgaggagctggaaggtgaggagttcgatggcgaggtg
atcgcagccggcgatgacaacgtcgacgagccaaccctcgatgctgccgcagacgaagaa
gaaccgcaggaataa
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