Pseudomonas hygromyciniae: JTY93_10500
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Entry
JTY93_10500 CDS
T09404
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
phyg
Pseudomonas hygromyciniae
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phyg01002
]
JTY93_10500
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
phyg01011
]
JTY93_10500
Peptidases and inhibitors [BR:
phyg01002
]
Cysteine peptidases
Family C82
JTY93_10500
Peptidoglycan biosynthesis and degradation proteins [BR:
phyg01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
JTY93_10500
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QSB41739
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Position
2395241..2396806
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AA seq
521 aa
AA seq
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MFKKTACYLSLCLLVAPLVATADEVPVEPSNPVQLALGQLSSVCPGLATQLDTPAELRLQ
AFYQQQGDTALWLVEGRRQALQDQLLLLADDGLDPAHYRLPDTTSTGNVLCTDFETSQHY
LQALHDLHYGRLQQAHYEPLWHSQPPSEDPALAVLALANAGLADIPAAFDQARPSAQLYR
SLRTAYATQRLQPLAQWGVIADGPLLRPGRDDPRVPALARRLVSGGYLASVPKGNQYANE
LVEGVKRFQASHSLQADGVIGPGTVAELNVSPAVRREQLRVNLERFRWLAQDLEPDGILV
NVAAAQLSVYQGGVPVWQTRLQVGRAERQTPLLKSRITRLTLNPTWTIPPTIMREDKLPA
IRLNPEYLRQQNLKVLDSEGRALSPEQVDWSHPGNILLRQDAGPRNPLGKIVMRFPNPFS
VYLHDTPSQPLFSKGPRAFSSGCVRVEQPMLLRDLLVSPAERARTEELLATGVTHEFRLA
TPVPVLLGYWTVQVDSQGALLYAPDIYSRDGVLLKALGAVL
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaaaaaaactgcatgttacttgagcctttgcttgctcgtagcaccattggtcgcc
acggccgatgaagtgccggtcgagccgtcaaacccagtacagctggcacttgggcagttg
tcgagtgtctgccccggtttagccacccagttggatacgccagccgagttgcggctgcag
gctttttaccagcaacaaggcgataccgccctctggttggtggaggggcgccggcaggcg
ttgcaggaccagttgctgttgctggccgacgacggcctcgacccggcgcattatcggctg
cccgatacgacaagcaccggcaatgtgctgtgtaccgacttcgaaaccagtcagcactat
ctgcaagccctgcatgacttgcactatggccgtttgcagcaggcccattacgagccgctg
tggcattcccagccgccgagcgaggacccagccctcgcggtgctggccctggccaacgcc
gggcttgccgacatacctgcggcattcgaccaggccaggcccagcgcacagctgtaccgc
agcctgcgcacggcctacgccacccagcgcctgcaacccttggcgcaatggggcgtgatt
gccgacggcccgttgttgcgccctggccgggacgacccacgggtgccggcattggcccga
cgcctggtcagtggcggttatctggcgagcgtgcccaagggcaatcaatacgccaatgag
ttggtggagggcgtgaagcgcttccaggccagccattcgctgcaagccgatggggtgatc
ggcccggggacggtggccgaactcaacgtcagcccggcggtgcggcgcgagcaactgcgg
gtcaatctcgagcgcttccgctggttggcccaggacctggagccggacggcatcctggtc
aacgtcgcggcggcgcagttaagcgtctaccagggcggcgtccccgtgtggcagacccgc
ttgcaggtgggccgcgccgaacggcaaacgccgctgctcaagtcgcgcatcacgcggttg
accctcaaccctacctggacgatcccaccgacgatcatgcgcgaggacaagctgccagcc
attcgcctgaacccggagtacttgcgccagcagaacctcaaggtactcgacagcgaaggt
cgcgcactctcgcccgagcaggtggattggtcgcaccccggcaatatcctcctgcgccag
gacgccggcccgcgcaacccgctgggcaagattgtcatgcgtttccccaacccgttttcc
gtgtacctgcacgatacgcccagccagccgttgttcagcaaggggccacgggcgttcagc
tcggggtgtgtgcgggtggagcagccgatgttgctgcgcgatctgctggtgagcccggct
gaaagggcgcgtaccgaggagttgctggcgaccggggtgacccacgagttccgcctggct
acgccggtccccgtgttgctgggctattggacagtgcaagtggatagccagggtgcgttg
ctgtacgcgccggatatctatagccgcgatggcgtgttgttgaaggcgctgggcgcggtc
ctatag
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