Pseudomonas hygromyciniae: JTY93_10695
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Entry
JTY93_10695 CDS
T09404
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
phyg
Pseudomonas hygromyciniae
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phyg03400
]
JTY93_10695
DNA repair and recombination proteins [BR:
phyg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JTY93_10695
Archaeal homologous recombinant proteins
JTY93_10695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
Vps5
ABC_tran
nSTAND3
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QSB41772
LinkDB
All DBs
Position
complement(2445511..2449149)
Genome browser
AA seq
1212 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LGDTGQAKMPDADTDISIGDPRTLIRRGTGGGYAEVDFIGVNGRRYRARWEANRARDKAS
GKLQHSRQSLIDLDSEQLLASQKTEYKTQLELALGLNFEQFTRAVLLAQSEFSAFLKAND
NERSELLEKLTDTALYTQLGQRAFIKAREAKDAHKLLQDQATGVTPLPAEARAELDQNLS
AAQQQLKTQQAQLKQLELQHTWLKELREWQERQHSAVEQLQQAEQAWHSQAPQRLDLSRL
EQLAPQRHHFARHSDLTGQLQPLAAQIRQHLEQQTALHARQEQLQQQQASAHAALAAALQ
QQTEAVPLLRQAFEEHSTLARLTRELAQSSEQQQLGQAACAEGQASLEALHTQQQQVASR
LQQLAAQLERSAALAPLSDAWNAYRDRLQQLMLIGNRLNKGQAELPQLEERANRTSEQWT
QQRTALDLLYQEAGAEPHAVAEQIQLLDSLLKDNRKQQRAFEDLTRLWDSQQQLDQQQKE
LALKQATAQQQREQLNQTGLQAKAELTVAEQTLSVTKQLLERQRLARSASVEELRGQLQD
EQPCPVCGSVEHPYHQPEALLHSLTRHDENEEARAQQAVDSLKEKLTELRGEVGGLIAQQ
KEFLQQQEQLATQLQALAPSLEAHPLSAALFNQDSSKRSAWLAQQLGQLNQSITQDEQRQ
GALLNLQQNAGRLQQQVQAAQDASQQARQQLIDQQRELASDRERLDEELNAFASLLPAET
LAGLRTEPAATFMLLDQQISQRLEQLGYQKDELAEQQQRQQAIEKEQDRQQHRQQQLDVL
HQQLAQLTIQQQAAQQALSALVGSHDSAEHWQQQLDQAVEQARLSETQANQQLQDTRNEL
IQLAADLKSRQERQHALDTELQALNSRINDWRAQHPELDDTGLAHLLAFDETGVSDLRQQ
VQHSEKAIEQAKVLLQEREQRLKDHQALHNGNLDAEQLDSALADLNQQLNSGEKHCAELR
AQQAEDQRRQDANQTLALTTAKAYEQWQRWARLDALIGSATGDKFRKFAQAYNLDLLVHH
ANVQLRQLVRRYRLKRGGSMLGLLVLDTEMGDELRSVHSLSGGETFLVSLALALGLASMA
SSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQVK
RQGNGLSTLEVK
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcgccatccgcctgaaaaacctcgcctcactggccgggccgttcgagatc
gactttaccgccgagcccctggccagcgccgggttgtttgcgattaccggacccaccggc
gccggcaaaagcaccttgctcgatgccttgtgcctggcgctgtttggcgccgtgccacgc
ctgggcgataccggccaggcgaaaatgcccgatgccgataccgatatctccattggcgac
ccacgcaccctgatccggcgcggcaccggtgggggttatgccgaggtcgactttatcggc
gtcaatggccgccgctaccgtgcgcgctgggaagccaaccgcgcccgcgacaaggccagc
ggcaagctgcaacacagccgccagagcctgatcgacctggacagcgagcagctgctggcc
agccagaaaaccgaatacaagacccagctggaactggccctgggcctgaatttcgagcag
ttcacccgggcggtgttgctggcgcaaagtgagttcagcgcgtttctcaaggccaacgac
aacgagcgcagcgaactgctggaaaagctcaccgacaccgcgctttacacacaactgggg
cagcgcgcgttcatcaaggcccgggaggccaaggacgcccacaagctgctgcaggaccag
gccacaggtgtcacgccgctgccggccgaggcccgcgccgagctggatcaaaatttgagc
gcggcccagcagcagctcaagacccagcaggcccaactcaagcagctggaactgcaacac
acctggctcaaggaactgcgcgagtggcaggagcgccagcacagtgcggtcgagcaactg
caacaggccgagcaggcgtggcacagccaggccccgcaacgcctggacttgagccgcctg
gagcaactggcgccgcagcgtcatcattttgcgcggcacagcgacttgaccggccagttg
cagcccctggcggcgcagatccgccagcaccttgagcagcagacagccctgcacgcgcgt
caggagcaattgcagcaacagcaagccagcgcgcacgccgccttggctgcggccctgcaa
caacagaccgaggcggtgccgttgctgcgccaggccttcgaggaacacagcaccctcgcc
cgcctgacccgcgagctggcccaaagcagcgaacaacaacagcttgggcaagccgcctgc
gccgagggccaggccagcctggaggccttgcacacccagcaacagcaggttgccagccgc
ctgcaacaactggccgcacaacttgaacgcagcgccgccctcgcgcccttgagtgatgcc
tggaacgcctaccgcgaccgcctgcaacaactgatgctgatcggcaatcgcctgaacaaa
ggccaggccgaactgccgcagcttgaggaacgggccaaccgcaccagcgaacaatggact
caacagcgcacagctttggacctgctgtatcaggaagccggcgccgaaccccacgccgtg
gccgagcagatccagttgctcgacagcctgctcaaggacaatcgcaagcaacaacgggcc
ttcgaggacttgacgcggctctgggacagccagcagcaattggaccagcagcaaaaggaa
ctggccctcaagcaggccaccgcccagcaacagcgcgagcaactgaaccagaccggcctg
caagccaaggccgaactgacggtggccgagcagaccctgagcgtgaccaagcagctattg
gagcgccaacgcctggcacgcagtgccagtgtcgaggagttgcgtgggcaattgcaggat
gagcagccgtgcccggtatgcggcagcgtcgagcatccctaccaccagcccgaagcccta
ctgcacagcctcacacgccatgatgaaaacgaagaagcccgtgcgcagcaagccgtcgac
agcctcaaggaaaaactcaccgaactgcgcggtgaagtgggtggattgatcgcccagcaa
aaggagttcctgcaacaacaggaacaactggcgacccagctccaggccctggcgccgagc
ctcgaggcccatccgttgagcgccgccttgttcaaccaggacagcagcaaacgcagcgcc
tggctggcgcagcaactgggccagctcaaccagagcatcacccaggacgaacagcgccag
ggcgccctgctcaacctgcaacaaaatgccgggcgcctgcagcaacaggtgcaagccgcc
caggacgccagccagcaagcccgccagcagttgatcgaccagcaacgggaactggccagc
gaccgcgagcgcctggacgaagagctcaacgccttcgccagcctgctgccggccgagaca
ctcgccggcctgcgcacggagccggcggcaacgttcatgctgttggaccagcagatcagc
cagcgcctggagcaattgggctaccagaaggatgaactggccgagcagcagcaacgccag
caagccatcgaaaaagaacaagaccgccagcagcatcgtcagcaacagttggacgtgctg
caccagcaattggcacagttgaccatccaacagcaggccgcccagcaagcactcagcgca
ctggtgggcagccatgacagcgccgagcattggcagcagcaactcgatcaagccgtggag
caagcccgcctcagcgaaacccaggccaatcaacagttgcaggacacccgcaacgaactg
atccaactggccgccgacctcaagtcccggcaagagcgccagcacgccctggacaccgag
ctacaggcgctgaacagccgtatcaacgactggcgcgcccagcatccggagctggacgac
acgggcctggcacacctgttggccttcgatgagaccggcgtcagcgacctgcgccagcag
gtacagcacagcgaaaaagccatcgaacaggccaaggtgctgctgcaagagcgcgagcaa
cgcctcaaggaccatcaggccctgcacaacggcaacctcgacgccgaacagttggacagc
gccctggccgatctcaaccagcaactcaacagcggcgaaaaacactgcgccgaactgcgt
gcccagcaagccgaggaccagcggcgccaggacgccaaccagaccctggcgctcaccacc
gccaaagcctatgaacaatggcagcgctgggcccggctcgatgcgctgatcgggtcggcc
accggtgacaagttccgcaaattcgcccaggcctacaacctcgacctgctggtgcaccac
gccaacgtacaactgcgccaactggtgcgccgctaccgtctcaagcgcggcggcagcatg
ctgggcctgctggtgctggacacggaaatgggcgatgaactgcgttcggtgcactcgctg
tccggtggcgagacgttcctggtgtccctggccctggcgctggggttggcgtcgatggcc
tccagcaccctgaagatcgaatcgttatttatcgacgaaggcttcggcagcctggatccc
gaatccctgcaactggcgatggatgctctggacggcctgcaagcccaagggcgcaaggtg
gcagtgatctcccacgtgcaggaaatgcacgagcgcattcccgtgcagatccaggtcaag
cgccagggcaatggtttgagcaccctggaggtgaagtga
DBGET
integrated database retrieval system
