Pseudomonas hygromyciniae: JTY93_12730
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Entry
JTY93_12730 CDS
T09404
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
phyg
Pseudomonas hygromyciniae
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phyg03400
]
JTY93_12730
Enzymes [BR:
phyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JTY93_12730
DNA repair and recombination proteins [BR:
phyg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
JTY93_12730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
DUF3670
Motif
Other DBs
NCBI-ProteinID:
QSB42124
LinkDB
All DBs
Position
complement(2884535..2887708)
Genome browser
AA seq
1057 aa
AA seq
DB search
MNNIEFISAGAGSGKTYKLTETLAQALESGTARPHAILATTFTVKAATELRERARSWLLE
KGRIDLATAIGQARLGTVNSVCGQMLKRFCFELGLSPDQTVLGEGQSKRLLKATLAESMD
ADAQAELVWLTERFGIEQADWSKTVEAVVKAALDNDIEPGALRVMGTQNADAMLANWPVP
TAGLNPTMALATALAKAHQEVTAYVEQQQAVGAKVADNLLKGLDGLQKLDRLFREGRWCW
PDWIGAAGFDAGAKVRDIVAPVKSAAQAHESHPAFHAEVRRYLDKVFKLAADVLDAYEQA
KKALGAVDFSDQEVLLLRALRTKPAVREVLAAELDLIMVDEFQDTSPLQLALFVELAKLA
KKSVWVGDPKQAIYGFRGTDSSLISGVLSAIKGWGGVIGKALDTSRRSTESQVLLTNSVF
NSAFEPDLTPEQVRLQPLRKDIPDQPALLNWNFESSRNDSDYLGLGQAIRELLESGVKVE
DKDTKELRPIQAGDVGVLCRYNDQVEFAVTSLTRWGIPSASPRSGLLGTAEAIYVMACLR
RMNDPTDTVATALVLTLADGTPIETWLADRLQYLATDGVRSHEWLTKGDSAHPLLARLEE
LRPTLMALTPQEVLRLAAAESQVVRLVGQWSTSPHESRNRLSNVEALVELGKTFEDECVA
AKRPATVSGMLRWLDELASAEDDNRAISEDNSVSVLTYHGAKGLEWPIVVLTSLDATARS
SLWGVRARTVGGFDPQQPLANRFVHCWLKTWGKRSQPQAALNAEASATGQAMQAEALAEN
KRLLYVGLTRARDMNVAVSFVRKSGAGRAWVGEIQGAADLLFGDSGTIAIPDGQQLSRLS
RSWNKDDCSTEPPAKASEACRWFTARPRVQAEPLWHRPSSASGGTFKVVETDAVGVRLSL
AGKPDMASLGTALHLCIARAGVLGGISAPDVERILITWAVAHSVDKEAVCAQARAFQAWV
AKRWPACPVYVEVPIEANGPNGTRIRGRIDLLVELPDSWILMDHKSNPGGSARDEDLVAE
HGPQLESYGHALLNATGKPVSERWLYMPVAARAVRLC
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacatcgaattcatcagcgcaggtgccggcagtggcaagacctacaagctgacc
gaaactctcgcacaagccctcgaatctggcacggcacggcctcacgccatcttggccacg
accttcacggtgaaggccgctaccgagctgcgcgaacgcgcccgctcctggcttcttgaa
aagggccgtatcgacctcgccaccgccataggccaagcccgcttgggcaccgtcaacagt
gtctgcggtcagatgctcaagcggttctgcttcgagttgggcctgtctcccgaccagact
gtcctgggtgaaggtcaatccaagagactgctcaaagccacgctggccgagtcgatggat
gccgacgcacaagcggaactagtttggctcacagagcggttcggcatcgaacaggcggac
tggtccaagactgttgaggctgtcgtcaaggccgcgctcgataacgacattgagccaggg
gcgcttcgcgtgatgggtactcagaacgcggacgctatgctcgcgaactggcctgttcca
actgcggggctgaacccgaccatggcgttggccaccgcgctggccaaggcgcaccaagaa
gtaaccgcctacgtagaacagcagcaggctgtcggcgccaaagttgcagacaacctctta
aaaggcctcgacgggctgcaaaaactggatcgcctcttccgtgaaggacgctggtgctgg
cccgactggatcggcgcagcagggtttgacgccggcgctaaggtcagggatatcgtggca
ccagtcaagtccgcagctcaggcccacgagtctcacccggcctttcatgccgaggtccgt
cggtaccttgacaaggtgttcaagctggccgccgacgttctcgacgcctacgagcaggcc
aagaaggcgctgggtgcagtcgacttcagcgaccaagaggtgttgctgctacgtgcattg
aggacaaagccagccgtccgtgaagtgttggcagcagaactggatctcatcatggtcgat
gagttccaggacaccagcccgctccaactggcgcttttcgtcgagctggccaaactggct
aagaagtcggtgtgggtcggcgaccccaagcaggctatctacggcttccgcggaactgac
tcaagcctcatttccggcgttctcagcgccatcaagggctggggcggagtcatagggaag
gctctggacacctccaggcgctccaccgaaagccaggtcttgctcactaatagtgtattc
aactctgcgttcgagcccgacctgacgcctgagcaggttcggttgcagcctctgcggaag
gacatcccggaccagcccgcgctgttgaactggaacttcgagagcagccgaaacgactcg
gactacctaggccttggccaggccatccgcgagctgctcgagtccggggttaaggtcgaa
gacaaggacaccaaggagctccgtccgattcaggccggcgatgtcggagtgctgtgtcgc
tacaacgaccaggtcgaatttgccgtcacgtcgctcacgcgctggggcatcccgtcagcc
agcccacgttccggcttgttggggactgccgaagccatctatgtcatggcctgtctgagg
cgcatgaacgacccaaccgacaccgtcgccacggcgctggttctaaccctggccgatggc
actccgatcgagacctggcttgcagacaggctgcaatacctagccaccgatggggtgagg
tcacacgagtggctgacgaagggtgacagcgcccatccgctactggcccgattggaagag
ctgcgtccaacgctaatggctttgacgccacaggaagtactgcgacttgctgctgccgag
tcccaagtggtgcggctggtcggccaatggtccacctcccctcacgagagccgcaatagg
ctgtccaatgtcgaggcactggtcgagctcggaaagaccttcgaggacgagtgtgtcgcc
gcgaagcgaccggcgaccgtcagcggcatgcttcgttggctggacgaactcgccagcgca
gaggacgataaccgggccatttcagaagacaactcggtctcagtcctcacctatcacggg
gccaaggggctggagtggccaatcgtcgtgctgacaagcctcgatgcgacagcacgcagt
tcactttggggcgtgcgcgcgaggacagttgggggcttcgatccgcagcagccgctcgcc
aaccgcttcgtacactgctggctgaagacctggggcaagcggtcccagccccaagccgcc
ctcaacgccgaagccagcgccactggtcaagccatgcaggcagaagccctggcggagaac
aagcgccttctctatgtgggcctgacccgcgcgcgtgatatgaacgtcgcagtgtcgttc
gttcgcaagtcaggggcggggcgcgcctgggtcggcgaaattcaaggcgcagccgacctg
ttgttcggcgactcaggaaccatagcgatacccgacggccagcagctctccagattatcg
aggtcgtggaacaaggatgactgctcaaccgaaccacctgccaaagcctccgaggcctgc
cgctggttcacagctcgtccgcgcgtgcaggccgagccgttgtggcatcgaccgagttct
gcctcgggcggcacgttcaaggtagtcgagactgacgcagtaggagtccggctaagcttg
gcgggcaagcccgacatggcatcgctgggcacggcgctccacctgtgcatcgctcgcgcc
ggcgtgcttggcgggatttcagcccctgacgtcgaacgaatcctgataacctgggccgtg
gctcattctgtggataaggaagccgtttgcgcccaggccagagcgttccaagcttgggta
gccaagcgctggcctgcctgtcccgtttacgtcgaagtgcccatcgaagccaatggccct
aacggcactcgtatccggggccgcatcgacttgctggttgaactgccagatagttggatt
ctcatggaccacaagtcgaaccccggtggctcagccagagacgaggacctggtggctgag
cacggcccgcagctcgagtcctatggtcatgcccttctcaacgcgaccggcaagcccgtg
agcgagcgatggctctacatgccggtcgctgcacgagcagtccgcctctgctga
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