KEGG   Pseudomonas hygromyciniae: JTY93_14265
Entry
JTY93_14265       CDS       T09404                                 
Name
(GenBank) sigma 54-interacting transcriptional regulator
  KO
K11914  sigma-54 dependent transcriptional regulator
Organism
phyg  Pseudomonas hygromyciniae
Brite
KEGG Orthology (KO) [BR:phyg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:phyg03000]
    JTY93_14265
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:phyg02044]
    JTY93_14265
Transcription factors [BR:phyg03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    JTY93_14265
Secretion system [BR:phyg02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   JTY93_14265
SSDB
Motif
Pfam: Sigma54_activat AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 HTH_30 GAF_3 AAA_2 GAF_2 HTH_50 HTH_28 GAF AAA_7
Other DBs
NCBI-ProteinID: QSB37543
UniProt: A0ABX7JRC8
LinkDB
Position
complement(3261471..3262994)
AA seq 507 aa
MRDNPLSPPLDAAEQLVQWLLRLGIDSDRASVPGDLVHAAVQLSQCSLSQVYLSDEAGHG
LVLAAEHRREEGPWPIGAGAEVDQQGQQLLRFALEHKRPLSICGLQGSIYDTAFIPSGRE
PWQSLLCVPITHRDLPMRGVLLCVTQRFQDLQGCAAALGQLGAFALRQRALLLALNPPAP
VRPALDSVLRPAGLGLIGNSPAMDDTCRLIGKVLDSTYTVLLHGETGTGKEVVARAIHVM
GPRRSKAFVVQNCAAFPEGLLESELFGYRKGAFTGADRDRPGLFDTADGGTLLLDEIGDM
PMSLQAKLLRVLQEGEIRPLGASTAHKVDVRIIAATHRDLRAMVTQGSFREDLYYRLAQF
PIELPALRQREGDVRELARHFAAKACATQRRSPVSWSNQALDQLSSHSFPGNVRELKCLV
ERAVLLCDDGVILAQHLLLPMDSPAPARDATLRQRLERVERGLLIDCLHKNRGNRTRTAR
ELGVARRTLLYRLARLNIPFGDVKEGG
NT seq 1524 nt   +upstreamnt  +downstreamnt
atgagggacaacccgttgtcaccgccgctggacgctgccgaacaactggtgcaatggctc
ttgcgcctgggcatcgatagtgatcgggcaagtgtgcctggcgatcttgtccatgccgcc
gtgcagttgagccagtgctcgctcagccaggtgtacctgtcagatgaggctggccacggc
ttggtcctggctgccgaacaccggcgagaagaagggccttggcctatcggcgcaggcgca
gaggtcgaccaacagggccagcaactactgcgctttgccctggaacataagcgccccctg
agcatctgcggcctgcaaggcagcatttatgacacggctttcattccatccggtcgggag
ccctggcagtcgctgctgtgcgtgccgatcacccatcgagaccttcccatgaggggcgtg
ctgttatgcgtgacgcaacgcttccaggacctgcaggggtgcgccgcagcactggggcag
ttgggggcttttgcgctgcgtcagcgggcgcttctgctggcactcaacccgccggcgccg
gtccgcccggcgctcgacagcgtgctgcgtcccgcaggtcttggcctgataggcaacagc
ccggcgatggatgatacctgccggttgattggcaaggtgctggacagcacctacaccgtg
ctgctgcacggtgagaccggtaccggcaaggaggtggttgccagggcgatccatgtcatg
ggcccgcgccgatccaaggcctttgtcgtacagaactgcgcggcattccccgagggattg
ctggaaagcgaactgttcggctaccgcaagggcgcctttaccggtgccgaccgggatcgt
cctggcctgttcgataccgccgacggcggtacgttgctgctcgatgaaatcggcgacatg
ccaatgtcgctgcaagccaaattattgcgggtattacaggagggtgaaatacgcccactg
ggtgccagcaccgcccacaaagtggatgtgcggatcattgccgccacccaccgtgacctg
cgggcgatggtgacccagggcagttttcgtgaggatctctactaccgattggctcagttt
ccgatcgaactgccggctctgcgccaacgcgaaggcgatgtgcgggagttggctcggcat
ttcgccgccaaggcctgcgccacccagcggcgatccccggtgtcctggtcgaaccaggcc
ctggatcagctatcgagccacagcttccccggcaacgtgcgcgaacttaaatgcctggtg
gagcgagccgtgctgttgtgcgatgacggggtcatcctggcgcaacatctcttgctgcca
atggactcacccgcaccggccagggatgcaacgctgcgccaacgccttgagcgcgtcgag
cggggcttactgattgattgcctgcacaagaaccgtggcaatcgcacccgcaccgcccgg
gagctgggggttgcgcggcgcaccctgctgtatcgcctggcgcggctgaatatccccttc
ggtgacgtcaaggaagggggctga

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