Pseudomonas hygromyciniae: JTY93_15935
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Entry
JTY93_15935 CDS
T09404
Name
(GenBank) RHS domain-containing protein
Organism
phyg
Pseudomonas hygromyciniae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
TEN_YD-shell
DUF4595
ParBc
ParBc_2
Motif
Other DBs
NCBI-ProteinID:
QSB37819
LinkDB
All DBs
Position
3603466..3608085
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AA seq
1539 aa
AA seq
DB search
MPAPAPDSSPLDLIEYELNGFHQSLAVYRQQVTSWYAQALDKASHATDLPSLLGMERVLR
VGDSQVSVSMTDTDFASSVAVCPAGGELKIQSKFESVYDVPLGNLQVQVLGLDDGSSTFI
QLDEQGQASHHCVAGGRYQVRVQGGVSPAQVEALFASYDGLTVELQAWLRKEWSGFKPHW
QASSASAIGSGILAGTWSAISGVWDSVSLVQDILKDPAQHIERLGTQAAELAALAREAPQ
VMEQAMLLASDEAALYLMLRTAMIWLSALPPSQVAGKTAEVITGLAVSLLIDLLIALVLT
IALQGAGIAYLGLRLAKYGSQVVELAVGFVKGVFDILKRFMAAVDRYKAVAVRGVVGGLQ
KGGLQMHWGARRNTTLKQLEAVDDAPSSAKNPNGAASASADKTATHGCPVSMVTGEELLT
LTDGELQGVLPFAWTRLYRTSAVEVDCGLGFGWSHSLAQRLVVVGESVVWTDHENRSTTF
PLPSAARPAISNSLAEAAIYLGAASDELVLAQGARFYHFQDGVLTAISDGYDNRLRISRD
VSGRILRLDNDAGRALLLRYDRGHIVAVDYQVFRVESEADDAWVTEQNVVSYRYDEQWRL
VEATNAVGESERYQYDSLAVITERQLAGGASFFWAWERSGKAARCVRHWASFAQMDTRYV
WDDDGRVTLLNADGSQEVYVHDPRARLVQRVDPDGGEHFKSYDAQGRLTVEQDPLGAITA
YQYDEAGRLVALFPGDDEPTAYEYEHGFVRVMRRGAAVWKYQRNDQGDITRQTDPDGNVT
EYSYDKRGQLLAVWYPDHSCQRLTWNDLGQLVGEQLPNGGVRRYRYDDLGRQIAREDEHG
ALTHYHWDAVGRLLKVVLPGGATRELSYNPYGKIIAERDELGRVTRYEYADGLHLISRRI
NPDGTALRYRYDNTRLLLTEIENESGERYQLAYHPNGLIQQETGFDGKRTTYVYDLNGHL
QEKTEFGDDDRQLITAYQRDNAGRLIRKTLPDGSTVDYTYDRLGNLLSVDDGHWPLHYEY
DRQNRLTAEHQGWGTLRYGYDSCGQLDHLRLPDNNHLTFNHDKGGHLATVELNGRTLTSH
LFKAGREQQRQQGQLLSHYHYDDQGRLTQHQHRHYTYDKSGNLTRLLDTRKGQHDYHYDP
LDRLTRADHSQDVQERFAHDPAGNLLMQDRPGPGIVVGNRLLLQGDRHCDYDAFGNLIRE
RRGRAQQRVTEYRYDCQHRLIGITQPDGSQASYRYDPFGRRISKTVAGKTTEFFWQGDKV
IAEHTHGQHRSYLYEPDSFRPLALLDGFGPANTQVFHYQLDHLGTPQELTSADGKIVWSA
HYQAYGKITRLDVGTVDNPLRFQGQYYDRESGLHYNRHRYYNPDNGRYLTPDPVKLAGGV
NGYLYVPNPTGWVDPLGLNACPGGDGCKPKGSSADSPHNAAIDEGLPSLPLIHEVDARTL
NRTHSIEGRRSTKRVEEISSNMRSNGYNKNTPIDVIEYNEQRYIIDGHHRASAARRTHTL
VTIRLIDNIENHDTSFSSINDVVSSSKTAGPDRLERSRK
NT seq
4620 nt
NT seq
+upstream
nt +downstream
nt
atgccagctcctgcccctgattcatcccccctcgacctgatcgaatacgagctgaacggc
tttcaccagagcctggcggtgtatcgccagcaggtaaccagctggtacgcgcaagccctg
gacaaggccagccatgccacggatttgccgtcgttgctgggcatggagcgagtgctgcgg
gtcggcgactcccaagtgtcggtgagcatgaccgacaccgattttgcttccagtgttgcc
gtgtgcccggcaggcggcgagctgaagatccagagcaaattcgagtcggtgtatgacgtg
ccgctgggcaatctccaggtgcaggtgcttggcctggatgacggcagttccacgtttatc
caactggatgaacagggtcaggcctcccatcactgcgtggccggcgggcgctatcaggtg
cgtgtgcagggcggggtgtcgccggcgcaggtggaggcgctgtttgcgtcctacgacggt
ttgaccgttgagctgcaagcctggctgcgcaaggagtggagtgggttcaaaccgcactgg
caggcctccagcgcgagcgccattggcagtgggatattggccgggacctggtcagccatt
tccggggtgtgggacagcgtgtcgctggtgcaggacatcctcaaggacccggcccagcac
atcgaacgcctcggcacccaggccgccgagctggcagccctggcgcgtgaagcgccccaa
gtgatggaacaggcgatgctgctggccagcgacgaggcagcgctgtacctgatgttacgc
acggcgatgatctggctgtcggcgttgccgcccagccaggtggcggggaaaaccgccgag
gtgattaccgggcttgccgtgtcgctgctcattgatttgctgattgcgctggtgctgacc
attgccctgcaaggtgccgggatcgcgtatctggggctgcggctggcgaagtatggatcg
caggtggttgagcttgcggtgggcttcgtcaaaggcgtgttcgacatcctcaagcgtttt
atggcggcggtggatcgctacaaggcggtggccgtgcgcggcgtcgtcggcggcttacaa
aaaggcggcctgcagatgcactggggggcgcggcgcaataccacgctcaagcaacttgag
gcggtggatgacgcgccctcctccgcgaaaaaccccaacggcgcagccagcgccagcgcc
gataaaaccgcgacccatggctgcccggtgtccatggtcactggcgaagaactgctgacc
ctgaccgatggcgagttgcagggcgtgctgccgtttgcctggacacggctgtatcgcacc
agtgccgtggaggtggattgcgggctggggtttggctggagccattccctggcccagcgg
ctggtggtggtcggtgagtcggtggtgtggaccgatcacgagaaccgcagtaccaccttt
cccctgccgtccgctgcccgcccggccatcagcaatagcctggccgaggcagcgatttat
ctgggggcggcgtcggatgaactggtgctggcgcagggggcacggttctaccactttcaa
gacggtgtgctgacggcgatcagcgatgggtatgacaaccgcctgcgtatttcccgcgat
gtatcggggcggattctgcgcctggataacgatgccgggcgggcgctgctgttgcgctat
gaccgcgggcatatcgtggcggtggactatcaggtgtttcgcgtggaaagcgaagcggat
gacgcctgggtgactgagcagaacgtcgtttcctaccgctatgacgaacagtggcgactg
gttgaggcgaccaatgctgtaggcgaaagcgagcgttatcagtacgacagccttgcggta
atcactgaacggcagttggccggtggggcgagtttcttctgggcgtgggaacggtctggc
aaggcagcgcgctgtgtgcggcattgggccagttttgcgcagatggatacgcgctatgtc
tgggatgacgacggccgcgtcaccctgcttaacgccgatggcagccaggaagtctacgtg
catgacccgcgcgcacggctggtgcagcgggtcgacccggacggcggcgagcatttcaag
tcctacgacgcccagggtcggctgacggttgaacaggatccccttggggcgattacagcc
tatcagtacgacgaggctgggcgcttggtggcgctgtttccgggggatgacgagcctacc
gcctacgagtatgagcatggcttcgtacgggtcatgcgtcggggtgcggcggtctggaag
taccagcgtaacgatcagggcgatatcacccgccagactgatcctgatggcaacgttact
gagtacagctatgacaaacgtgggcagcttttagcggtttggtatccggaccacagctgt
cagcgcctgacctggaatgaccttgggcagttggttggggagcaactgcccaatggcggc
gtgcggcgttatcgctatgacgacctgggccggcagattgcccgtgaagatgaacatggc
gccctgacccactatcactgggacgcggtaggccgactgctcaaggtggtattgccgggc
ggcgccacccgcgaattgagctacaacccctacggaaaaatcatcgccgagcgcgatgaa
ctgggccgtgtgacccggtatgaatatgccgacggactgcacctgatcagtcgccggatc
aaccccgatggcacggcgctgcgctatcgctacgacaacacccgcctgctgctgaccgaa
atcgaaaacgagtcaggcgagcgctatcaactggcgtaccaccccaacggcctgatccaa
caggaaaccggcttcgacggcaaacgcaccacctacgtctacgacctcaacggccacctg
caggaaaaaaccgagttcggcgacgatgaccgtcagctgattaccgcctaccagcgcgac
aacgccggccgccttataagaaaaaccctgcccgatggcagcacggtggattacacctac
gaccgcctcggcaatctcttaagcgtcgacgacggccactggccgctgcattacgaatac
gaccgccaaaaccgcctgaccgccgaacaccagggctggggcaccttgcgctacggctac
gacagctgcggccaactcgaccacctgcgcctgcccgacaacaaccacctgaccttcaac
cacgacaagggcggccacctcgccaccgttgagctcaatggccgcacactcacctcacac
ctgttcaaagccgggcgcgagcaacagcgccagcagggccaactgctcagccactaccac
tacgacgaccagggccgcctgacccaacaccaacaccgccactacacctacgacaaaagc
ggcaacctcacccgcctgctcgacacccgcaagggccagcacgactaccactacgacccc
ctcgaccgcctgacccgcgccgaccactcgcaagacgtgcaagaacgcttcgcccacgac
ccggcgggcaacctgctgatgcaagaccgcccaggccccggcatcgtcgtcggcaaccgc
ctgttactacaaggcgaccggcattgcgactacgacgccttcggaaacctcatacgcgaa
cgccgtggccgcgcacagcaacgggtcaccgaataccgctacgactgccagcaccgcctg
atcggcatcacccaaccagacggcagccaggccagctatcgctatgacccatttggccgg
cgcatcagcaaaaccgtggcgggcaagacgacagagtttttctggcaaggcgacaaggtt
atcgccgagcacacacatggccagcaccgtagctatctctacgagccggacagcttcagg
ccgctggccttgctagacggtttcgggccggccaatacacaggtcttccactaccaactt
gaccacctgggcacaccgcaggaactgaccagcgcagacggcaaaatcgtctggtctgcc
cattaccaggcctacgggaaaatcacccggttggatgtaggcacggtcgacaacccactg
cgctttcaggggcagtattacgaccgggaaagcgggctgcattacaaccggcatcgctac
tacaatccggacaacggacgctacctgacccccgacccggtgaagttggcgggtggggtg
aacgggtatttgtatgtgcccaacccaacggggtgggtggatccgttggggttgaatgcg
tgtccgggtggggatgggtgcaagccgaagggaagtagcgccgactccccccacaatgca
gcaatagatgagggtttaccctcactgcctctaattcacgaagttgatgcccgaactctg
aatcgtacgcacagtattgagggaagacggtcaaccaaacgagttgaggagatttctagt
aacatgcgaagcaatgggtacaacaaaaacacccctattgacgtaatcgaatataacgag
cagcgttatattattgatgggcaccatcgggcgtctgcagcaaggcgaacacatacactt
gtcaccataagactgattgacaatatagaaaaccacgatacctcatttagcagcatcaat
gacgtagtgagctcttcaaaaaccgctggaccagataggctagaaaggtcaagaaaatga
DBGET
integrated database retrieval system
