Pseudomonas hygromyciniae: JTY93_16615
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Entry
JTY93_16615 CDS
T09404
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
phyg
Pseudomonas hygromyciniae
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyg03000
]
JTY93_16615
Transcription factors [BR:
phyg03000
]
Prokaryotic type
Helix-turn-helix
LysR family
JTY93_16615
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Ortholog
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
HTH_20
HTH_23
DExH14_plug
Motif
Other DBs
NCBI-ProteinID:
QSB37929
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Position
complement(3773019..3773921)
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AA seq
300 aa
AA seq
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MTVKQMRAFLAVAQTLSFAAACERLHLSQSALSLTIKGLEEGLGGRLFSRNTRNVALTPE
GESLLPLARRLIADWDNAEDELRQRFTLQRGRVTVAAMPSFAGNLLPPILKIFRARFPQV
NVTVHDLINEQVLEMVRDRQVELGVAFEPSPGSSLAFTPLYLDRFVAVVPGDSALAHMSE
IDWKTLLAQPFITLQRPSTVRVMLEEHLGVLQMKLPVALESHQLATVGKMVASGLGVSAV
PALCAPQMEEAGAHCITLCDPVIERPIGVLTKPGHELSAAAQALFDIFRDEAGKGRFPGI
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgacagttaaacagatgcgggcctttctggccgtggcccagaccctgagttttgccgcc
gcttgtgagcgcctgcatttgtcccagtcggccctgagcctgacgatcaaaggcctggag
gagggcctgggcgggcggctgttcagccgtaatacgcgcaacgtcgcactgaccccggaa
ggcgaatccctgttgcccctggcccgccggttgattgctgactgggacaatgccgaggac
gaattgcgccagcgtttcactttgcagcgcgggcgtgtgacggtggcggcgatgccgtcg
tttgccggcaatctgttgccgccgatcctgaagatctttcgcgcgcggtttccccaggtc
aatgtcacggtgcacgacctgatcaatgaacaggtgctggagatggtccgcgatcgccag
gtcgaactgggtgtggcattcgagccctcgccggggtcgtcgctggcctttaccccgctg
tatctggaccgctttgttgcggtcgtacccggtgattcagcgttggcgcacatgagcgaa
atcgactggaaaaccctgctggcgcaacctttcatcaccttgcagcggccttctacggtc
cgggtgatgcttgaagagcacctgggtgtattgcagatgaagctgccggtggcattggag
agccatcaattggcaacggtgggcaagatggttgccagtggcctgggcgtcagcgccgta
cccgcgttgtgcgccccgcagatggaagaggcgggcgcccattgcatcactttgtgtgac
ccggtgatcgagcgaccgattggcgtgctgaccaagccagggcatgaactgtcggcggcg
gcgcaggcactgtttgatatcttccgggacgaagcggggaaggggcggtttccggggatt
taa
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